Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2137 ATGGAATCATCCTCTTTCCCGCTGCTATTTGGCGAATTTACCCATCCAATCTCCTCCACTCCTCTCAGCTTTCTCCTCTTCACAACATCCAACTTTTCCTGGAAAATCGAGGCCCTGAAAATGTCAGATTCCGAGGACGAAAATCCCGAACTTACTCCCCAGTCAAAGCCTACCGCCGAGGAACCTGGGTCTGTCATGGATTTCGACCTCGACCCAGAGACTTCTTGGCCTTTAGATCAGATAGCTTTCACCTCTAACCCTATGTCCCCTTTTCTGATCTCCTCCACCTCCGAGCAACCTTCTTCTCCTCTCTGGCTTTTCTCGGACTTGGACGATGATGGGCAAGCTAAACTTGCCACTTCGGCCCTCTCCGACGTCCATCGATTGCTCTCCTGCAATTCGAATTCAGTAGCTGAAAAACCAGTGGAGAATGAGGAGACCAAAAATACCTCATCGCCGTGTGTGGCCCTGCCACCACTACCATTAGAAACTCCAGATGGGTACTGTTTCATTAAAGAAAGGATGACACAAGCACTAAGGTACTTCAAAGAATTGACTGACCAGAATGTTCTGGCTCAGGTTTGGGCACCTGTGAAAGTCGGGAACCAGTATGTCCTTACAACTTCAGGGCAACCCTTTGTTCTTGATCCCCATAGTAATGGACTGTATCAGTATAGAACAGTCTCTCTTATGTACATGTTTTCAGTGGATGGGGAGAGTGATGGAATCCTTGGCCTTCCTGGTCGTGTTTTTCATCAGAAGTTACCAGAATGGTCTCCCAATGTTCAATATTATTCTAATAAAGAGTATCCCCGCCGAAATCATGCTCAACATTACAATGTTCGTGGAACCTTGGCTTTGCCTGTGTTTGAACCTTCAGGGCAGTCATGTATTGGTGTTCTGGAGTTGATAATGACTTCTCAGAAGATTAACTATGCCCCTGAGGTTGATAAAATATGCAAAGCTCTTGAGGCAGTAAATCTGAAGAGTTCAGAAATTTTGGAGCATCCATTCACTCAGATTTGTAATGAAAGCCGTCAGAATGCATTGGCAGAGATATTGGAGATATTGACAGTGGTCTGTGAAACTCATAAATTACCTCTGGCCCAAACATGGGTTCCCTGTAGGCATCGGAGTGTTCTGGCCAATGGCGGTGGCCTGAAGAAAAGCTGCTCCAGCTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCTACTACTGATGTTGCATTCTATGTCATAGATGCTCATATGTGGGGTTTCCATGAAGCCTGTGCTGAGCATCACTTGCAACAAGGCCAAGGGGTTGCTGGGAAGGCATTTTTGTCTGGCAATATGTGCTTCTGTGGGAACATTACCCGGTTCTGCAAAATTGAGTACCCTTTAGTACATTATGCTCTCCTGTTTGGCTTAACCAGCTGTTTTGCTGTCTGTTTGCAAAGCTCTCATACTGGAAATGATGATTATATATTAGAGTTTTTTCTGCCTCCTAAGGTCACAGAATTAAAAAGAACAAAAGACTATGTGGGGTCTATAGTAGCAACAATGAAACAGCATTTTCATGGTCTTAAGATAGCTGCTGGTTTTGAACTTGAGGAGGAATTTTCAGTTGAAATCATTGAAACGACGAGTGAAAGGGTTTATTCAAGACTTGAATCTATTGTGATTGCCGAACTTCCTAAATCGCCATATGGACCTGATGCCTTGCCAAATATGGGGGAGATGGTCCCACTGGATACGTCAGAGCAGCAAATGGTATTCTTGAATGATATAAATGGACGAGGGAATCTTGGTGACAAAGCTGGTGGAGCTTCTGATCATATATCTTCTTTGGGGACTAAAAACATAAAGAAACCCTCTGAGAGAAAACGGGGAAAAACTGAAAAATCAATTAGTCTTGAAGTTTTGCAAAATTATTTCGCTGGGAGCCTTAAAGATGCTGCAAAGAGTCTTGGTGTTTGCCCCACTACCATGAAGCGCATATGTAGGCAGCATGGGATATCGCGTTGGCCATCTCGGAAGATTAACAAGGTCAATCGTTCCCTGTCCAAGCTCAAGCGGGTCATTGAATCTGTCCAAGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAGTACCAGTCCACTTCCCATGGCTGTTGGTTCCTTTCCTGAGCCTTCAAACAAGTTCAGCCAGCAAGCCTCGCTAAGCGCGCTCCTGGCAGAACCACAGATGAAAGAGAGTGAGTTGGATGCTTGCAAAGTATCAGAAACAAACAGGCAAACTGAGGTAGAACATCAGTTGGTAGGAGGAAGGGTACAAAGTCCTGAGACAGGGATACGTGAGAAAAGTGGGTCCAGTCAGGAGTTTGGTAAATGTCTGAAGGACCTAGAACGGCGAGCGCCTCAAGTGAAGATTGGGCGAACCCTACTTCTAATGGTTCGTGTGTCATGGTAG 2436 0.4516 MESSSFPLLFGEFTHPISSTPLSFLLFTTSNFSWKIEALKMSDSEDENPELTPQSKPTAEEPGSVMDFDLDPETSWPLDQIAFTSNPMSPFLISSTSEQPSSPLWLFSDLDDDGQAKLATSALSDVHRLLSCNSNSVAEKPVENEETKNTSSPCVALPPLPLETPDGYCFIKERMTQALRYFKELTDQNVLAQVWAPVKVGNQYVLTTSGQPFVLDPHSNGLYQYRTVSLMYMFSVDGESDGILGLPGRVFHQKLPEWSPNVQYYSNKEYPRRNHAQHYNVRGTLALPVFEPSGQSCIGVLELIMTSQKINYAPEVDKICKALEAVNLKSSEILEHPFTQICNESRQNALAEILEILTVVCETHKLPLAQTWVPCRHRSVLANGGGLKKSCSSFDGSCMGQVCMSTTDVAFYVIDAHMWGFHEACAEHHLQQGQGVAGKAFLSGNMCFCGNITRFCKIEYPLVHYALLFGLTSCFAVCLQSSHTGNDDYILEFFLPPKVTELKRTKDYVGSIVATMKQHFHGLKIAAGFELEEEFSVEIIETTSERVYSRLESIVIAELPKSPYGPDALPNMGEMVPLDTSEQQMVFLNDINGRGNLGDKAGGASDHISSLGTKNIKKPSERKRGKTEKSISLEVLQNYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPMAVGSFPEPSNKFSQQASLSALLAEPQMKESELDACKVSETNRQTEVEHQLVGGRVQSPETGIREKSGSSQEFGKCLKDLERRAPQVKIGRTLLLMVRVSW 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2137 811 ProSiteProfiles RWP-RK domain profile. 617 698 IPR003035 -
Prci14g2137 811 PANTHER PROTEIN NLP8 97 781 IPR045012 GO:0003700
Prci14g2137 811 MobiDBLite consensus disorder prediction 598 628 - -
Prci14g2137 811 Pfam RWP-RK domain 630 678 IPR003035 -
Prci14g2137 811 MobiDBLite consensus disorder prediction 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2137 Prci-Chr14 28710259 28714277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2137 222 713 NLP Transcription Factor Family AT1G64530 65.789 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci14g2137 RWP-RK 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2137 - - gmx:100786118 1097.42