Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2111 ATGTTTCCTTCACAACGAGGCGATGAGATGGTCATCGAATTTTCTAGTTGTCCCCACCATCAACAACAGAAAATGTCAGAGGATCTCATTCTGGACGACTATGCTCATACTTCTCTGGATTTCCTCGATTTTTCTCATAAAAAATTACAAGGTCGTACCGACAAGCCGAAGAAACTACTTTACGAGTCGTCTGATGATAAGATTAATTACCATTATCGAAATTCTGAAAACGACTACAAGAAGAAGAACGAGAGGCTGGTTCACAGGGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACCCTCCATGCCTCTCTTAGATCTCTTCTCCCACTTGAGTTCATCAAGGGAAAGCGTTCGATATCAGACCACATGAATGAGGCGAAGAACTACATAAAGCACCTGCAGAAGAAAATCAAAGAACTGAGCGCCAAGAGAGATGAACTGAAGAGACTATCGAAGAATTCTTCAAATCCAGAAACACTCGAGTGCGAAGAGTACACGTGTAGCGGTTTTTTCAGTATTCACGAGATTAATACTAATGGTGGTGTGGGAATAGAAGTTTCTAGTTCCTTCGGAGAGGAAAGGCTTTCCCTTTCAAAAGTGCTTAAACTGGTGCTTGACGAAGGACTTGGAGTTGTTAATTGTGTTTCCACCGAAGTCAATGGCAGATTACTTCACAGTGTTCAGTGTGAGGTTAACAGTTCCGACCGCGTAGACTTACCCGCGCTGAGGAGGAAAATTGTCAATCTAGTCCCATCATTTAAATGTCGTGATTAA 780 0.4244 MFPSQRGDEMVIEFSSCPHHQQQKMSEDLILDDYAHTSLDFLDFSHKKLQGRTDKPKKLLYESSDDKINYHYRNSENDYKKKNERLVHREIERQRRQEMATLHASLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKKIKELSAKRDELKRLSKNSSNPETLECEEYTCSGFFSIHEINTNGGVGIEVSSSFGEERLSLSKVLKLVLDEGLGVVNCVSTEVNGRLLHSVQCEVNSSDRVDLPALRRKIVNLVPSFKCRD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2111 259 Pfam Helix-loop-helix DNA-binding domain 85 136 IPR011598 GO:0046983
Prci14g2111 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 135 IPR011598 GO:0046983
Prci14g2111 259 FunFam Transcription factor bHLH126 75 163 - -
Prci14g2111 259 Gene3D - 74 164 IPR036638 GO:0046983
Prci14g2111 259 Coils Coil 125 155 - -
Prci14g2111 259 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 73 251 - -
Prci14g2111 259 SMART finulus 89 141 IPR011598 GO:0046983
Prci14g2111 259 CDD bHLH_AtORG2_like 84 160 - -
Prci14g2111 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 150 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2111 Prci-Chr14 28355936 28357451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2111 88 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 47.590 3.78e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g2111 HLH 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2111 - - gmx:100780888 267.7