Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2110 ATGAGCAGAGGGAAGAAGCATCATATTACACTGCCTTCTTCCGACAATAATCATGATGATGAGAAGAAGATCATTCGTAGGGAAACTGAAAGGAACAGAAGGCTGCAAATGACCTCCCTTTGTGAATCACTCCGATCTCTGCTGCCTTTTGAGCTCATCAAGGGAAAGCGTTCAGTGTCCGATCACATAGGAGAGGCTGCGAGTTATATCAAAGAGTTGAAGGAGAAAACCCGAGAACTCGAAATTAAGAGAGATATGCTCAAACAAAATGCTAATCCAAGTTTGCTTGGCGGTGCTGGAATAGATGAAAGCTCAAGCCATTCAAATGCTGTCAAATGTGTAAGCATTTCGCCTTTTCCGGGTGGCGTCGAAATTTCTGCAGACAGTGGCTTGGAGGAAAACAGTTTTCCACTGTCATTCTTGGTGGAAATATTGATGCAAGAAGGATGTAATGTTGTAAGCTGTGTGTCCACCCAAGTGAATGGGAGGCTATACCACTCCATTAAGTCTGAGATCAATTCTTGA 525 0.4343 MSRGKKHHITLPSSDNNHDDEKKIIRRETERNRRLQMTSLCESLRSLLPFELIKGKRSVSDHIGEAASYIKELKEKTRELEIKRDMLKQNANPSLLGGAGIDESSSHSNAVKCVSISPFPGGVEISADSGLEENSFPLSFLVEILMQEGCNVVSCVSTQVNGRLYHSIKSEINS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2110 174 SMART finulus 27 79 IPR011598 GO:0046983
Prci14g2110 174 Gene3D - 13 95 IPR036638 GO:0046983
Prci14g2110 174 Pfam Helix-loop-helix DNA-binding domain 26 74 IPR011598 GO:0046983
Prci14g2110 174 Coils Coil 70 90 - -
Prci14g2110 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 16 171 - -
Prci14g2110 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 18 92 IPR036638 GO:0046983
Prci14g2110 174 MobiDBLite consensus disorder prediction 8 24 - -
Prci14g2110 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 21 73 IPR011598 GO:0046983
Prci14g2110 174 CDD bHLH_AtORG2_like 22 89 - -
Prci14g2110 174 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2110 Prci-Chr14 28343124 28348609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2110 6 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 38.012 2.30e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g2110 HLH 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2110 - - ccaj:109790384 182.956