Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2107 ATGATGAAGCCGTTGCATCCAGTCGGCGATGAAGATTTGTTCTTTATGATTCCCTTTCAGAACCCTTCTCCTCTCTCAATACAAACGATCCCAGAAGACGACATCTTTCATGATCCTGCAGAAGTGAAGGCTTACGAAAGCTTTCCACCTAATTTTGGAAGTGAAGTTATACCAAAGGGGAGGGGCAAGCAGCAGCAAAATAAGGAATTTCCAGTTAAAACAGCTGAAGATGCTAACAAGAAGTGGATGCATAGAGAGACAGAAAGACAAAGACGACAAGAAATGGCCACGCTTTGCGCCTCCATCAGATTGGCTTTGCCTCTCGAATATATCAGGGGAAAGCGATCAGCATCTGATCAAATTGATGGGGCTGTGAAATATATCAAACACCTAGAGAACAAGGTCAAGCAATTGATGGCAAAGAGAGATGAGTTGATGAAAAATGGAAATGGAATCTCTGTTATTATTCATCCTTACCAGGGTGGAGCTGAGATTAACTGCAGTTATAGATTCAGAGAGTACTTATTTACTCAGTCAACACTCTTGAGTATTTTGATTAAAGAAGGGCTTAATGTGGTGAGCTGCACTTCTATCAAAAGGGATGAGACGTTCATTCACACAATCCGATTAGAGGTTTCTGATATTGGTGAGAGTACTACTGACCATTCTGAACTGCAAAGGAGGCTTACTGCAGCAATATTATCTACAGAACACAGAGACACAGCATCTGAACCAGAAAACTGCTGA 747 0.4163 MMKPLHPVGDEDLFFMIPFQNPSPLSIQTIPEDDIFHDPAEVKAYESFPPNFGSEVIPKGRGKQQQNKEFPVKTAEDANKKWMHRETERQRRQEMATLCASIRLALPLEYIRGKRSASDQIDGAVKYIKHLENKVKQLMAKRDELMKNGNGISVIIHPYQGGAEINCSYRFREYLFTQSTLLSILIKEGLNVVSCTSIKRDETFIHTIRLEVSDIGESTTDHSELQRRLTAAILSTEHRDTASEPENC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2107 248 CDD bHLH_AtORG2_like 80 147 - -
Prci14g2107 248 Pfam Helix-loop-helix DNA-binding domain 81 132 IPR011598 GO:0046983
Prci14g2107 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 131 IPR011598 GO:0046983
Prci14g2107 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 71 231 - -
Prci14g2107 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 159 IPR036638 GO:0046983
Prci14g2107 248 Coils Coil 121 148 - -
Prci14g2107 248 Gene3D - 71 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2107 Prci-Chr14 28336424 28337854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2107 69 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 39.227 9.62e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g2107 HLH 7.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2107 - - pcin:129292108 501.516