Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2106 ATGATGAAGCCATTGCATCCAGTTGGCGATGAAGATTTGTTCTTCCAGATTTCATTTCTGAACCGTTCTCCTCTCTCAATACAAACGATCCCAGAAGATGACATCTTTCATGAAACTGCAGAAGTGAAGGATTACGAAAGCTTTCCGCCTAATTTTGGGAATGAAGTTATACCAAAGGGGAAGGGAAAGCAGCAGCAAAAGGAATTTCCAGTTAAAAATGCTGAAGATGCTAACAAGAAGTGGATGCATAGAGAGACAGAAAGACAAAGACGACAAGAAATGGCCGCTCTTTTCGCCTCCCTCAGATCCGCTTTGCCTCTCGAATATATCAGGGGAAAACGATCAACATCTGAACAAATTGATGGGGCTGCGAAATATATCAAACACCTAAAGAACAAGGTAAACCAATTGAAGGCAAAGAGAGATGAGTTGATGAAAAATGGAAATGGAATCTCTGTTATTGTTCATCCTCACAAGGGTGGAGCTGAGATTATCTGCAGTTATAGGTTCAGAGAGTACTTATTTACTCAGTCAACACTCTTGAGTATTTTGATCAAAGAAGGGCTTAACGTGGTGGGCTGCACTTCTATCACAAGGGACGAGACGTTCATTCACACAATCCAATTAGAGGATTCTGATATCGCTGAGAGTACTACTGAATACTCTGAACTGCAAAGGAAGCTTACTGCAGCAATATTATCTACAGAACAGAGAGACTGCATCTGA 726 0.4118 MMKPLHPVGDEDLFFQISFLNRSPLSIQTIPEDDIFHETAEVKDYESFPPNFGNEVIPKGKGKQQQKEFPVKNAEDANKKWMHRETERQRRQEMAALFASLRSALPLEYIRGKRSTSEQIDGAAKYIKHLKNKVNQLKAKRDELMKNGNGISVIVHPHKGGAEIICSYRFREYLFTQSTLLSILIKEGLNVVGCTSITRDETFIHTIQLEDSDIAESTTEYSELQRKLTAAILSTEQRDCI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2106 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
Prci14g2106 241 Pfam Helix-loop-helix DNA-binding domain 80 131 IPR011598 GO:0046983
Prci14g2106 241 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 70 229 - -
Prci14g2106 241 SMART finulus 84 136 IPR011598 GO:0046983
Prci14g2106 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 154 IPR036638 GO:0046983
Prci14g2106 241 Coils Coil 120 147 - -
Prci14g2106 241 CDD bHLH_AtORG2_like 79 146 - -
Prci14g2106 241 Gene3D - 70 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2106 Prci-Chr14 28325819 28327146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2106 79 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.176 1.16e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci14g2106 HLH 7.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2106 - - pcin:129292108 409.453