Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2095 ATGGATAGAAACCCTCCTCCTGCGAACTTGCCTCAACAAGAACAGCCTTCTGCTTCTTCGCCTTCTCCTTCTGTCCTACAAGTGCCTTCGTCTCATGAGTCTTCTTCGTCTCTGAGGACGCTGAGATCACCGGGCGGGTCGTCGTCGGGTCAGCACACCAGCAGGAGACACGCAACGTTCCGGGGAATCCGGAGCCGAAGCGGAAAATGGGTGTCGGAGATACGGGAGCCTCGTAAAACCACGCGCATTTGGCTGGGGACGTACCCGACGCCGGAGATGGCTGCGGCCGCCTATGACGTGGCGGCACTTGCATTGAAGGGGCCTGACACGACCCTGAACTTCCCCAATTTGATTCTCTCTTACCCGATCCCAGCGTCATTGTCGGCGGCCGATATTCGGGCGGCGGCTGCTGCGGCTGCAGAGGCGAGGCTGGTGAGGTCTGAGGAAAGCGGAGGACAGAACGCTGGAGAAAGAGGAGGAAGCCAAGCCGAGGGCTCGAGCCAGCCGGGAGAAGTGGCGGTGGAGAAAAGCGAGGAATTTATCGATGAGGACGAGCTATTGAATATGCCTAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCTCCGTACGCTTCCGATGATTCACCGGGCAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 690 0.5783 MDRNPPPANLPQQEQPSASSPSPSVLQVPSSHESSSSLRTLRSPGGSSSGQHTSRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPNLILSYPIPASLSAADIRAAAAAAAEARLVRSEESGGQNAGERGGSQAEGSSQPGEVAVEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPGNSDHGDSLWSF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2095 229 MobiDBLite consensus disorder prediction 1 69 - -
Prci14g2095 229 MobiDBLite consensus disorder prediction 154 168 - -
Prci14g2095 229 SUPERFAMILY DNA-binding domain 60 116 IPR016177 GO:0003677
Prci14g2095 229 ProSiteProfiles AP2/ERF domain profile. 59 115 IPR001471 GO:0003700|GO:0006355
Prci14g2095 229 Gene3D AP2/ERF domain 59 116 IPR036955 GO:0003700|GO:0006355
Prci14g2095 229 MobiDBLite consensus disorder prediction 213 229 - -
Prci14g2095 229 MobiDBLite consensus disorder prediction 13 56 - -
Prci14g2095 229 CDD AP2 60 117 IPR001471 GO:0003700|GO:0006355
Prci14g2095 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 200 - -
Prci14g2095 229 SMART rav1_2 59 121 IPR001471 GO:0003700|GO:0006355
Prci14g2095 229 FunFam Ethylene-responsive transcription factor 2 58 116 - -
Prci14g2095 229 Pfam AP2 domain 61 107 IPR001471 GO:0003700|GO:0006355
Prci14g2095 229 MobiDBLite consensus disorder prediction 147 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2095 Prci-Chr14 28188344 28189334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2095 54 229 AP2-EREBP Transcription Factor Family AT5G52020 58.696 7.36e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci14g2095 AP2 2.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2095 - - pcin:129293795 385.185