Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2093 ATGGCTGATAATTCTTCACATCAAGTTGACTGCGAGAGGCTCGACATCACTGTCTTGCTCGTGGACGATGATACCTCCACTCTCTTTGTCAACGCTGGTATTCTCAGATCATGGGAATACAAAGTTGCAACTGCTACAAGTGGTCAAGAAGCATTGAGGACTCTCAGGGAATTCAGAGGCTTCTTCGACATCGTCATCACCGACCTGAACATGCGAGGAATGAATGGACTTGAACTCCAACAGCGTGTCAAACGAGAATTCCATCTTCCTGTCATCATTATGTCAGCAGATGGGAGGAAGAGTGTGATGTCGAGGAGTCTTGAGCACGGAGCAGCATTTTACATAGTGAAACCAGCACGACGAGAGGACTTCAAAGATGTATGGCAGTATGCTGTGGCGGGAAGGAGAGAGAAACTGAGAGTTGACAATGAAAGAATAATATCAGTGAACGAAGAAGGAGACTCATCGTCATCACCAGGTGGTGGTGAGAAGCAGCTGGGCATTAATATTCCCTCCGCTCAGGATTCTGAAGCGAGAGGGACGAGAAAAGCGCCTAAGCCGAGGAAGAAGTACTGCAAGAGAAAACGTAGTGTGGTTGAGAATGATGAACTCATATACTGTGGTCAAAAGAGGTCCAAGATTTTCTGGACCACTAATCTTCACAATCGCTTCTTGTTGGCCTTGAGACACCTAGGCATGAACAAGGCTGTTCCAACGAAGATTCTGGAGATCATGAACGTGCCAGGTTTGACCCGAGAGAACGTCGCCAGTCATTTGCAGAAATATCGAATGTTTCTGAAGAAAGTTGCAGACAAAGGAATCCTTGAGGGATTATCTGAGAGGGCCTTGAGGTCAAGGTTTGCTATGGGCCTTCCCACAGGTCTCATCAGAGATCTCCAAAAGAGAGTTAGCCGTTTTCGCCTTCTTGACTATAATCATCATCAACCTTACAGTGCTGTGTCTAGGCCTCAGATTCCTCTCAATCCTCCAACAACCAGACCCTCTCTCGCCATTCAACCCAGACTGGGACAACCAAGCCAATATGGGACCAATCATACTCTCAGAAACTTCCAACAATCCCGTTATCATGATCAAGCAAATCATCATCATCGTTCTATCCTAAATGGAGGGTTCATGACTTCTGCAAATGTCCTGACTGCAAATGGTTTGACGAGTAACGTCAACTATGGCCGAACTAACTATGATGATAACAACAACAACCATGGGATGATAGTGCCTTATGGAAGCTCTGGCCTGGAACGAAGTCCTGGGACATATAATAACCTCCATGGAACTCAACTGATGAACAATAATAATACTAACAACCATGGGATCATAGTGCCTTATGGAGGCTCTGGCCTGCAACGAAGTCCTAGCACTTCTAGTAAATGCCATGGAACTCAACTGAACAGCAATGCTGCTCTTGCTGTTGGTGCTTTGAATCGAGTTCAGAATGTTGGTTATAAAGGACATAACAACAACTACGATAACAGCAGCAGCATATTTGGCTTGTTAAATAATGGCAGTGCTTCAAATAATGCAATTGGCCCTTTATCACCCTCGGTTGTGAATGTCCGTGTCGAACCAAGTCGAGCAAACATATCTGCAGGGCTTCCATCTTTGCCTCAGCAGTCAATTAATGGTATTGGGAATGCTGGAGGTGTTAATCAGCATAATACTGTCACTTCAGGGAATCAGAAGGAGGCCGGCCAAATGGATGACCTCAATGAATTTTTCCTCATGATAGACGACATGGTTCTCCTAGACAAGACGGCAGAGAGCCCTCGTGCTGGTGAACTTTCTGGTTCTGAAATTCTTAGCTCCTTCAATGTTGAAGACTACATTGAGCTGTTGCAGGGAGATGGTGATGATCAAGAGAACACCCACACAAGTGAAAGAAGCATTGATGTTCTGTCAGCTGGCAAGTCCTTAACTTGTACCAACGAGAACCCTAATTTGGTGCTGAGCAACCATGCATCCACAAACTTGGAAGCCTCGGACATGTCCACGGCGGACAAGGCTAATTCACCAGAAGGAAACTCGGCTACTCCTCAAGAACAGGATTGGGACATGGATCTCATTGAAACGTTGTTCGGTACTGCTTCAGATCCCAGCCAGAAGTGA 2124 0.4581 MADNSSHQVDCERLDITVLLVDDDTSTLFVNAGILRSWEYKVATATSGQEALRTLREFRGFFDIVITDLNMRGMNGLELQQRVKREFHLPVIIMSADGRKSVMSRSLEHGAAFYIVKPARREDFKDVWQYAVAGRREKLRVDNERIISVNEEGDSSSSPGGGEKQLGINIPSAQDSEARGTRKAPKPRKKYCKRKRSVVENDELIYCGQKRSKIFWTTNLHNRFLLALRHLGMNKAVPTKILEIMNVPGLTRENVASHLQKYRMFLKKVADKGILEGLSERALRSRFAMGLPTGLIRDLQKRVSRFRLLDYNHHQPYSAVSRPQIPLNPPTTRPSLAIQPRLGQPSQYGTNHTLRNFQQSRYHDQANHHHRSILNGGFMTSANVLTANGLTSNVNYGRTNYDDNNNNHGMIVPYGSSGLERSPGTYNNLHGTQLMNNNNTNNHGIIVPYGGSGLQRSPSTSSKCHGTQLNSNAALAVGALNRVQNVGYKGHNNNYDNSSSIFGLLNNGSASNNAIGPLSPSVVNVRVEPSRANISAGLPSLPQQSINGIGNAGGVNQHNTVTSGNQKEAGQMDDLNEFFLMIDDMVLLDKTAESPRAGELSGSEILSSFNVEDYIELLQGDGDDQENTHTSERSIDVLSAGKSLTCTNENPNLVLSNHASTNLEASDMSTADKANSPEGNSATPQEQDWDMDLIETLFGTASDPSQK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2093 707 MobiDBLite consensus disorder prediction 667 687 - -
Prci14g2093 707 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Prci14g2093 707 MobiDBLite consensus disorder prediction 150 176 - -
Prci14g2093 707 Pfam Response regulator receiver domain 18 125 IPR001789 GO:0000160
Prci14g2093 707 Gene3D - 16 179 - -
Prci14g2093 707 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 264 IPR006447 GO:0003677
Prci14g2093 707 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Prci14g2093 707 FunFam Two-component response regulator 208 270 - -
Prci14g2093 707 SMART REC_2 16 128 IPR001789 GO:0000160
Prci14g2093 707 CDD REC_typeB_ARR-like 18 132 - -
Prci14g2093 707 ProSiteProfiles Response regulatory domain profile. 17 132 IPR001789 GO:0000160
Prci14g2093 707 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 326 IPR045279 GO:0009736
Prci14g2093 707 Gene3D - 208 270 - -
Prci14g2093 707 MobiDBLite consensus disorder prediction 150 193 - -
Prci14g2093 707 SUPERFAMILY CheY-like 16 137 IPR011006 -
Prci14g2093 707 MobiDBLite consensus disorder prediction 667 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2093 Prci-Chr14 28162464 28167832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2093 16 270 Response Regulator Gene Family AT2G25180 38.039 7.18e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci14g2093 Response_reg 8.5e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2093 - K14491 pcin:129292440 1385.93