Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2092 ATGATTTCTTCAGGTCGATGTGCAGCTTGCAGGAATCAAAGAAGAAGATGTCATTCCAATTGCATTTTCTCTCCTTATTTTCCAGCCAATGATCCTCAAAGATTCGCTTATGTTCATCGAATATATGGTGGTAGCAGGGTTGGCAGAATCCTTCAGCAAATTCCATCAAGTAGGAGGGCAGAAGCAGCAGATGCATTGTATTTTGAAGCAGAGTGTAGGATTGAAGATCCAGTGTGTGGGTGTGTGAAGATTATCTCAGAATTATGGCAACAAATTCACAATACAGAGATTGAGCTTGCCAGAGTCCAAGCTCTTGTTGCTTTGCACAGGTTTCAAATCCCACAAACTGAAGTTATCATGCCATCATCACAAAGCAGCACAGGCCACCTTTTTCAGATTAATTCTTCAACTCCTAATTGA 420 0.4119 MISSGRCAACRNQRRRCHSNCIFSPYFPANDPQRFAYVHRIYGGSRVGRILQQIPSSRRAEAADALYFEAECRIEDPVCGCVKIISELWQQIHNTEIELARVQALVALHRFQIPQTEVIMPSSQSSTGHLFQINSSTPN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2092 139 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Prci14g2092 139 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Prci14g2092 139 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2092 Prci-Chr14 28158335 28158942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2092 2 118 AS2 family AT3G26620 53.846 4.94e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci14g2092 LOB 5.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2092 - - pcin:129292439 278.87