Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2083 ATGTCATTCTCATCAAATAATATTAGTATTTCGGGGTCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCAGAAAGTTCAGCAATTGCAAAAGAATCATGAGCAAATCCAGGGTGCTTCCAGTGCAACATCTTTGCCTGCAGCCCAAACTGGCTCTGCTCCACCGCCAATGGGTACGAGAGTTCCTTTGATACAAGATCCAAATAATCTAACCCAGATGCAGAAGAAACCTCGGATGGATATCAAGCAAGAAGATATAATGCATCAGCAGGCAATACAACAGCTTCTTCAGAGGCAGGACCCCATGCAGTTCCAGGGTCGTAATCCCCAACTACAGGCTGTGCTTCAGCAGCATAGATTGAGACAACAGCAACAGCAGCAACAAATCCTTCAGTCAATGCCACAGTTACAGAGGGCTCACTTGCAGCAACAACAGCAGCAGCAACAACAACATATGCAATTGAGGCAGCAATTACAGCAACAAGCAATGCAGCCGTCGTCTGCCATGAAGCGCCCATATGATAGTGGGGTGTGTGCCCGTCGTTTGATGCAATACCTATATCATCAAGGACAGCGACCAAATGATAATAGTATTGCCTACTGGAGAAAGTTTGTTGCTGAATATTACTCTCCTCGTGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAATGTTGGGCAGCATACTCTTGGTGTTTTCCCCCAAGCGGCTATGGATGCATGGCAATGCGACATATGTGGTTCTAAATCTGGACGGGGCTTTGAGGCAACTTTTGAAGTACTCCCCAGACTTAATGAAATCAAATTTGGCAGTGGGGTGATTGATGAGCTTATGTTTTTGGACTTTCCCCGTGAGTATAGATTACCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTCCATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCAAGGCGGCATGAAGAACTTCTTCCTCGAAGATTGGTTGCACCCCAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCGGAGTTCTATCACTGAAAGTGGATCTGATGGGATTTCTCAGCAGGACTTGCAGACAAACAGAAAAATGGTAATAACAGCTAGGTGTCAGCTGGCAAAGAGTTTGGACTTACAGTCTCTGAATGACTTGGGTTTCTCAAAACGCTATGTGAGATGTTTGCAGATATCGGAGGTTGTGAATAGTATGAAAGATCTGATGGATTTCTGCCGAGAGCACAAAGTTGGGGCACTTGAGGGCTTAAAAAATTATCCTCGACATGCAACTGCAGCCAAGCTCCAGATGCAAAAGATGCAAGAGATGGAACAGTTAGCGAGTGTTCAAGGTCTGCCAACTGACCGAAACACGCTTAGTAAGCTAATGGCTTTGCATCCTGGATTGAATAACCAAATCAGCAAAAATCCTAACCTTGGTAATCGTGGTACTTTGAGCGGATCTGCACAAGCTGCATTGGCACTGACTAACTACCATAATCTCCTCATGAGGCAAAACTCCATGAATTCAAACCCTAACTCACTTCAGAGAGAAGCATCTTCTTCCTTCAGTAATTCAAACCAGAGTCCCTCTTCTCACTTTCAAGGTGCCGCTGCTGCTTTGCTTCCAGGCTCCATGCAGAATTTACCTGTCAGTGGTTTCTCAAGTCCCCATCTATCTCCACAGCATCAGCAGCAGCATCTACAGCAACTTAAACAGCGCTCATTAAGTGCGAATAGTTTACTGCAGCAAAATCATCCGCAGGGCTCCCAAACAAATCAAGCTCTACCTCCCCAGATGCTCCGGCAACTAGTTCAGGAATTGTCGAATAACAGCAGTGGAGGAGTTCAACCGCATTTCCATGCTGGGCCCAACCCTAATGGAAGTATTACAAGTAATGGTTTGGGTTTTGGAGGTAACCCTCCACCAGCAACTGGAGGAACTTCCAACGTTTCAGGAAGTAATGGACCTGCTGCTCCTGGCAGAAGCAACAGCTTCAAAGCTCCTTCAAACAGTGATTCTTCTGCAGCTGGTGGGAACAATGGATTTAACCAAAGAACTTCTGATATATCACAAGATCTCCACCTGCAAGATGTGGTTCAGGATATTGCCCGTGAGTTCACTGATAATGGCTTCTTTAACAGTGACCTCGATGACTATGCTTGGAAGGAATGA 2244 0.4519 MSFSSNNISISGSSVMDGSSVVQQSSHQDQKVQQLQKNHEQIQGASSATSLPAAQTGSAPPPMGTRVPLIQDPNNLTQMQKKPRMDIKQEDIMHQQAIQQLLQRQDPMQFQGRNPQLQAVLQQHRLRQQQQQQQILQSMPQLQRAHLQQQQQQQQQHMQLRQQLQQQAMQPSSAMKRPYDSGVCARRLMQYLYHQGQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDFPREYRLPSGLMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVSQLVQVAEKCRSSITESGSDGISQQDLQTNRKMVITARCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREHKVGALEGLKNYPRHATAAKLQMQKMQEMEQLASVQGLPTDRNTLSKLMALHPGLNNQISKNPNLGNRGTLSGSAQAALALTNYHNLLMRQNSMNSNPNSLQREASSSFSNSNQSPSSHFQGAAAALLPGSMQNLPVSGFSSPHLSPQHQQQHLQQLKQRSLSANSLLQQNHPQGSQTNQALPPQMLRQLVQELSNNSSGGVQPHFHAGPNPNGSITSNGLGFGGNPPPATGGTSNVSGSNGPAAPGRSNSFKAPSNSDSSAAGGNNGFNQRTSDISQDLHLQDVVQDIAREFTDNGFFNSDLDDYAWKE 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2083 747 MobiDBLite consensus disorder prediction 633 714 - -
Prci14g2083 747 MobiDBLite consensus disorder prediction 146 177 - -
Prci14g2083 747 MobiDBLite consensus disorder prediction 571 596 - -
Prci14g2083 747 Coils Coil 147 170 - -
Prci14g2083 747 MobiDBLite consensus disorder prediction 146 174 - -
Prci14g2083 747 MobiDBLite consensus disorder prediction 1 76 - -
Prci14g2083 747 MobiDBLite consensus disorder prediction 528 557 - -
Prci14g2083 747 Pfam LIM-domain binding protein 187 446 IPR029005 -
Prci14g2083 747 PANTHER LIM DOMAIN-BINDING PROTEIN 1 736 IPR029005 -
Prci14g2083 747 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2083 Prci-Chr14 28060043 28066023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2083 175 453 C2H2 Transcription Factor Family AT1G43850 57.348 5.49e-107 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2083 - - qsa:O6P43_008259 974.541