Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2068 ATGCTCTTGAAAAAAAAGGAAATGGAGGGACACGTTGAGATGGGTCTTCTTGGGGACAACTTCGATCCGAGTTTGATTGCGAGGATTAGAGATGATGGCTATGAGAGTCGTTCTGGAAGCGATAATTTCGATGGCGTATCAGGGGAAGATGATCAGGATGCTGGTGACGATACGCCTGCTCAGAGATCCAAGAAGTACCATAGACACACTCCTCACCAAATTCAAGAGCTTGAAACTTTCTTTAAGGAGTGTCCTCATCCTGACGAGAAGCAAAGGTTGGAACTTAGCAGGAGGCTTGGCTTGGAGACTAAGCAAGTCAAATTCTGGTTTCAAAATCGACGAACCCAGATGAAGACCCAACTGGAGCGCCATGAGAATCTGATTCTGAGGCAAGAAAATGACAAGCTCCGAGCAGAGAACAGTATGATGAAGGAAGCCATGGCCAACCCAATATGCAACAATTGTGGGAGCCCAGCAATTCCCGGCCAAATCTCATTCGAAGAACACCAGCTAAGGATCGAAAATGCTCGCTTGAAGGACGAACTAAACCGCATATGTTCCTTGGCTAACAAGTTTCTGGGAAGGCCAATCTCAACCATGGCTCTCCCGAGCTCAAACTCTGGTCTTGAACTAGCCATTGGAAGAAACAATACTGTCAGTGGGATTGGCGGTATTCGTGCTGGGTCAGGCTTCCCAATGGGACTTGACATGGGGATGATGATGATGGGAAACGATCAAGTACAGGTGGAGAGATCTATGCTCATAGACCTTGCCTTGTCTGCTATGGAGGAACTGATGAAGATGGCTCAGGGAGATGCCCCTCTTTGGATTAAGACATTGGATGGCGAGAACGAAGTTCTGAATTTTGAGGAGTATACTCGGATTTTTCTTCCTTGTCTTGGCCCAAAGCCTCCTGCTTATGTCACGGAAGCTACCAGAGCCTCTGGAGTAGTGATGGTCAACAGTTTAGCCCTCATTGAGGCATTCATGGACATGAATCGATGGGCGGAGATGTTTCCAACCATGATCGCTAGAGCTGTGCCCCTCGATGTGATATCAAATGGTCTAGGAGGAACCAGGAACGGGACTTTGCTAGCGATGGAAGCTGAGGTGCAATTGCTTTCGCCACTTGTTCCTGTTCGGCAAACGAGGTTCCTCCGACTATGCAAGCAACAAGCAGAAAATCTATGGGCGGTGGTCGATGTTTCTATTGAGTTTGGTCGTGACCCCACCAATGCACACCCCTTCGTCACATGTAGGAGGCTTCCTTCTGGCTGCCTCGTGCAAGATATGCCCAACGGTTACTCCAAGGTTACTTGGGTGGAGCACTGGCAGTACGATGAGAATGTCGTCCACCAACTGTACCGTCCGATGGTTGGCGCCGGCATCGGCTTCGGTGCTCATAGATGGATTGCCACCCTCCAAAGGCAATGTGAATGTTTGGCCATCCTCTTGTCCTCTTCCATGCCTGCCGATGATCACACTACATTGAGCCAGGGTGGTCGGCGAAGCATGGTGAAGTTGGCACAGCGAATGATGGACAACTTCTGTTCTGGGCTCGTGGCTTCGTCGGCTCGGAGGTGGGACAGTCTTCATGTAGGGACGCTAGGCGAAGACGTGAAGGTGATGACTCGGAAGAACGAAGGCGAGCCAGGCGATCCTCCTGGCATCATGCTCAGCGCCGCGACTTCCTTCTGGCTGCCCGTGTCTCCGCAAACCTTGTTTGACTTCCTCCGTGACGACCGCCGGAGATTCGAGTGGGACATCTTGTCCAGTGGCGCCGGAACCATGCAGGAAGTCGCTCTTATCGTCAAAGGACAGACACCTGGTAACTGCGTTTCTCTTCTTCGTACCAACGGTGTTAATGGGAACGAGACGAGCATGGTGATACTGCAAGAGACATGTGCGGATGCTACAGGATCAATGGTAGTGTATGCACCGGTTGATGTCCAGTCGCTGAACGTGGTGATGAGTGGTGGAGATTCTTCGTACGTGGCTCTCTTGCCTTCTGGGTTTGCCATTCATCCCGACGGTCCTAATGTGGGTCGCAAAGGGAGTCCGGACAGCGGCGGCAGCGGCGGCGGCGGAAGCGTGCTGACGGTAGGGTTACAAATACTGGTGAACAGCCTGCCATCGGGGAAGCTGACGGTGGAATCCATTGAAACAGTGAACAATCTCATGACGGCCACAGTTGAGAAGATCAAAGAGGCGCTGAGATCAGTTGGATGA 2229 0.5137 MLLKKKEMEGHVEMGLLGDNFDPSLIARIRDDGYESRSGSDNFDGVSGEDDQDAGDDTPAQRSKKYHRHTPHQIQELETFFKECPHPDEKQRLELSRRLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKEAMANPICNNCGSPAIPGQISFEEHQLRIENARLKDELNRICSLANKFLGRPISTMALPSSNSGLELAIGRNNTVSGIGGIRAGSGFPMGLDMGMMMMGNDQVQVERSMLIDLALSAMEELMKMAQGDAPLWIKTLDGENEVLNFEEYTRIFLPCLGPKPPAYVTEATRASGVVMVNSLALIEAFMDMNRWAEMFPTMIARAVPLDVISNGLGGTRNGTLLAMEAEVQLLSPLVPVRQTRFLRLCKQQAENLWAVVDVSIEFGRDPTNAHPFVTCRRLPSGCLVQDMPNGYSKVTWVEHWQYDENVVHQLYRPMVGAGIGFGAHRWIATLQRQCECLAILLSSSMPADDHTTLSQGGRRSMVKLAQRMMDNFCSGLVASSARRWDSLHVGTLGEDVKVMTRKNEGEPGDPPGIMLSAATSFWLPVSPQTLFDFLRDDRRRFEWDILSSGAGTMQEVALIVKGQTPGNCVSLLRTNGVNGNETSMVILQETCADATGSMVVYAPVDVQSLNVVMSGGDSSYVALLPSGFAIHPDGPNVGRKGSPDSGGSGGGGSVLTVGLQILVNSLPSGKLTVESIETVNNLMTATVEKIKEALRSVG 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2068 742 SUPERFAMILY Homeodomain-like 49 120 IPR009057 -
Prci14g2068 742 CDD homeodomain 64 120 IPR001356 GO:0003677
Prci14g2068 742 ProSiteProfiles START domain profile. 247 483 IPR002913 GO:0008289
Prci14g2068 742 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 61 738 IPR042160 -
Prci14g2068 742 Pfam START domain 257 480 IPR002913 GO:0008289
Prci14g2068 742 Gene3D - 49 135 - -
Prci14g2068 742 CDD START_ArGLABRA2_like 251 479 - -
Prci14g2068 742 Gene3D - 256 469 IPR023393 -
Prci14g2068 742 FunFam Homeobox-leucine zipper protein HDG1 48 136 - -
Prci14g2068 742 Pfam Homeodomain 64 118 IPR001356 GO:0003677
Prci14g2068 742 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Prci14g2068 742 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Prci14g2068 742 SUPERFAMILY Bet v1-like 249 480 - -
Prci14g2068 742 MobiDBLite consensus disorder prediction 32 71 - -
Prci14g2068 742 MobiDBLite consensus disorder prediction 55 71 - -
Prci14g2068 742 SMART START_1 256 480 IPR002913 GO:0008289
Prci14g2068 742 SUPERFAMILY Bet v1-like 501 727 - -
Prci14g2068 742 Coils Coil 114 149 - -
Prci14g2068 742 SMART HOX_1 62 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2068 Prci-Chr14 27960808 27966097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2068 30 738 Homeobox Transcription Factor Family AT3G61150 56.831 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci14g2068 START 3.6e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2068 K09338 - gmx:100794400 1062.75