Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2066 ATGGAGGGACACGTTGAGATGGGTCTTCTTGGGGACAACTTCGATCCGAGTTTGATTGCGAGGATTAGAGATGATGGCTATGAGAGTCGTTCTGGAAGCGATAATTTCGATGGCGTATCAGGGGAAGATGATCAGGATGCTGGTGACGATACGCCTGCTCAGAGATCCAAGAAGTACCATAGACACACTCCTCACCAAATTCAAGAGCTTGAAACTTTCTTTAAGGAGTGTCCTCATCCTGACGAGAAGCAAAGGTTGGAACTTAGCAGGAGGCTTGGCTTGGAGACTAAGCAAGTCAAATTCTGGTTTCAAAATCGACGAACCCAGATGAAGACCCAACTGGAGCGCCATGAGAATCTGATTCTGAGGCAAGAAAATGACAAGCTCCGAGCAGAGAACAGTATGATGAAGGAAGCCATGGCCAACCCAATATGCAACAATTGTGGGAGCCCAGCAATTCCCGGCCAAATCTCATTCGAAGAACACCAGCTAAGGATCGAAAATGCTCGCTTGAAGGACGAACTAAACCGCATATGTTCCTTGGCTAACAAGTTTCTGGGAAGGCCAATCTCAACCATGGCTCTCCCGAGCTCAAACTCTGGTCTTGAACTAGCCATTGGAAGAAACAATACTGTCAGTGGGATTGGCGGTATTCGTGCTGGGTCAGGCTTCCCAATGGGACTTGACATGGGGATGATGATGATGGGAAACGATCAAGTACAGGTGGAGAGATCTATGCTCATAGACCTTGCCTTGTCTGCTATGGAGGAACTGATGAAGATGGCTCAGGGAGATGCCCCTCTTTGGATTAAGACATTGGATGGCGAGAACGAAGTTCTGAATTTTGAGGAGTATACTCGGATTTTTCTTCCTTGTCTTGGCCCAAAGCCTCCTGCTTATGTCACGGAAGCTACCAGAGCCTCTGGAGTAGTGATGGTCAACAGTTTAGCCCTCATTGAGGCATTCATGGACATGAATCGATGGGCGGAGATGTTTCCAACCATGATCGCTAGAGCTGTGCCCCTCGATGTGATATCAAATGGTCTAGGAGGAACCAGGAACGGGACTTTGCTAGCGATGGAAGCTGAGGTGCAATTGCTTTCGCCACTTGTTCCTGTTCGGCAAACGAGGTTCCTCCGACTATGCAAGCAACAAGCAGAAAATCTATGGGCGGTGGTCGATGTTTCTATTGAGTTTGGTCGTGACCCCACCAATGCACACCCCTTCGTCACATGTAGGAGGCTTCCTTCTGGCTGCCTCGTGCAAGATATGCCCAACGGTTACTCCAAGGTTACTTGGGTGGAGCACTGGCAGTACGATGAGAATGTCGTCCACCAACTGTACCGTCCGATGGTTGGCGCCGGCATCGGCTTCGGTGCTCATAGATGGATTGCCACCCTCCAAAGGCAATGTGAATGTTTGGCCATCCTCTTGTCCTCTTCCATGCCTGCCGATGATCACACTACATTGAGCCAGGGTGGTCGGCGAAGCATGGTGAAGTTGGCACAGCGAATGATGGACAACTTCTGTTCTGGGCTCGTGGCTTCGTCGGCTCGGAGGTGGGACAGTCTTCATGTAGGGACGCTAGGCGAAGACGTGAAGGTGATGACTCGGAAGAACGAAGGCGAGCCAGGCGATCCTCCTGGCATCATGCTCAGCGCCGCGACTTCCTTCTGGCTGCCCGTGTCTCCGCAAACCTTGTTTGACTTCCTCCGTGACGACCGCCGGAGATTCGAGTGGGACATCTTGTCCAGTGGCGCCGGAACCATGCAGGAAGTCGCTCTTATCGTCAAAGGACAGACACCTGGTAACTGCGTTTCTCTTCTTCGTACCAACGGTGTTAATGGGAACGAGACGAGCATGGTGATACTGCAAGAGACATGTGCGGATGCTACAGGATCAATGGTAGTGTATGCACCGGTTGATGTCCAGTCGCTGAACGTGGTGATGAGTGGTGGAGATTCTTCGTACGTGGCTCTCTTGCCTTCTGGGTTTGCCATTCATCCCGACGGTCCTAATGTGGGTCGCAAAGGGAGTCCGGACAGCGGCGGCAGCGGCGGCGGCGGAAGCGTGCTGACGGTAGGGTTACAAATACTGGTGAACAGCCTGCCATCGGGGAAGCTGACGGTGGAATCCATTGAAACAGTGAACAATCTCATGACGGCCACAGTTGAGAAGATCAAAGAGGCGCTGAGATCAGTTGGATGA 2208 0.5159 MEGHVEMGLLGDNFDPSLIARIRDDGYESRSGSDNFDGVSGEDDQDAGDDTPAQRSKKYHRHTPHQIQELETFFKECPHPDEKQRLELSRRLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKEAMANPICNNCGSPAIPGQISFEEHQLRIENARLKDELNRICSLANKFLGRPISTMALPSSNSGLELAIGRNNTVSGIGGIRAGSGFPMGLDMGMMMMGNDQVQVERSMLIDLALSAMEELMKMAQGDAPLWIKTLDGENEVLNFEEYTRIFLPCLGPKPPAYVTEATRASGVVMVNSLALIEAFMDMNRWAEMFPTMIARAVPLDVISNGLGGTRNGTLLAMEAEVQLLSPLVPVRQTRFLRLCKQQAENLWAVVDVSIEFGRDPTNAHPFVTCRRLPSGCLVQDMPNGYSKVTWVEHWQYDENVVHQLYRPMVGAGIGFGAHRWIATLQRQCECLAILLSSSMPADDHTTLSQGGRRSMVKLAQRMMDNFCSGLVASSARRWDSLHVGTLGEDVKVMTRKNEGEPGDPPGIMLSAATSFWLPVSPQTLFDFLRDDRRRFEWDILSSGAGTMQEVALIVKGQTPGNCVSLLRTNGVNGNETSMVILQETCADATGSMVVYAPVDVQSLNVVMSGGDSSYVALLPSGFAIHPDGPNVGRKGSPDSGGSGGGGSVLTVGLQILVNSLPSGKLTVESIETVNNLMTATVEKIKEALRSVG 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2066 735 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Prci14g2066 735 SUPERFAMILY Bet v1-like 494 720 - -
Prci14g2066 735 Pfam START domain 250 473 IPR002913 GO:0008289
Prci14g2066 735 Pfam Homeodomain 57 111 IPR001356 GO:0003677
Prci14g2066 735 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 731 IPR042160 -
Prci14g2066 735 SUPERFAMILY Bet v1-like 242 473 - -
Prci14g2066 735 ProSiteProfiles START domain profile. 240 476 IPR002913 GO:0008289
Prci14g2066 735 FunFam Homeobox-leucine zipper protein HDG1 41 129 - -
Prci14g2066 735 SUPERFAMILY Homeodomain-like 42 113 IPR009057 -
Prci14g2066 735 Gene3D - 42 128 - -
Prci14g2066 735 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Prci14g2066 735 Coils Coil 107 142 - -
Prci14g2066 735 Gene3D - 249 462 IPR023393 -
Prci14g2066 735 MobiDBLite consensus disorder prediction 25 64 - -
Prci14g2066 735 CDD homeodomain 57 113 IPR001356 GO:0003677
Prci14g2066 735 MobiDBLite consensus disorder prediction 48 64 - -
Prci14g2066 735 SMART START_1 249 473 IPR002913 GO:0008289
Prci14g2066 735 SMART HOX_1 55 117 IPR001356 GO:0003677
Prci14g2066 735 CDD START_ArGLABRA2_like 244 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2066 Prci-Chr14 27960808 27966521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2066 23 731 Homeobox Transcription Factor Family AT3G61150 56.831 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci14g2066 START 3.5e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2066 K09338 - gmx:100794400 1062.75