Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2059 ATGGCTCCGCCGCCGGTGGATCACAACGGCGAGTCCACGGCCGGTGACACCCAGAGATCTATTCCAACGCCGTTTCTCACCAAAACGTATCAGCTCGTCGACGACCACACCATAGACGATGTTATTTCGTGGAACGAAGACGGATCCACTTTCATCGTTTGGAACCCTACCGAATTCGCCAGAGATTTGCTTCCTAAATATTTTAAGCACAACAACTTCTCTAGCTTTGTCCGCCAACTCAACACCTATGGATTCAGAAAGGTTGTACCCGATCGGTGGGAGTTCTCGAACGAGTGTTTTCGCAGAGGCGAGAAACGGCTTTTGTGCGAGATACAGCGACGGAAGATTTCAACACCTTCGACGCCGCCAACGATGTCGCCGGTCGCGAAGGCCGGAGCCACTGCGACTGTGGCAGTGCCGACGCCGGTACCGTTGACTTCTATACCGACGGCGATGCCTATCATATCGCCATCAAACTCAGATGAAGAGCAAGTGATTTCGTCGAATTCGTCGTCCTCGAAAGCTCCGGCTGACCTCATAGATGAGAACGACAGGCTGCGGAAAGAGAACGTCCAGCTGTCGAAGGAATTAGCGGAGATGAGATCTCTCTGTAACAATATTTTCTCTCTGTTATCCAACTACACCAACAACCAAAACGATGGTGCTTTGCAAGGAAAAGACGCCGTGAAACCGCTGGATTTGATGCCGTCAAAACGGAACTCCGGTGAGGCGGCGGAAGAGTTAAATCCGAAGCTGTTTGGGGTGGCGATTGGGGCGAAGAGAGCGAGAGAAGCGACCGCTGGAGCGGAGGAGGAGGACACACTGTTAAGCTTACACCAGCCGGGGCCAACGGAGGTGAAATCTGAGCCGTTGGATTGTCAGAACGTTCGAGAGAATCAGGAGACACCGTGGCTGAATCAGTGCGACATGGCTAATCAGAGTGTGTGTAATTAA 954 0.5231 MAPPPVDHNGESTAGDTQRSIPTPFLTKTYQLVDDHTIDDVISWNEDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGEKRLLCEIQRRKISTPSTPPTMSPVAKAGATATVAVPTPVPLTSIPTAMPIISPSNSDEEQVISSNSSSSKAPADLIDENDRLRKENVQLSKELAEMRSLCNNIFSLLSNYTNNQNDGALQGKDAVKPLDLMPSKRNSGEAAEELNPKLFGVAIGAKRAREATAGAEEEDTLLSLHQPGPTEVKSEPLDCQNVRENQETPWLNQCDMANQSVCN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2059 317 MobiDBLite consensus disorder prediction 1 21 - -
Prci14g2059 317 MobiDBLite consensus disorder prediction 158 177 - -
Prci14g2059 317 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 MobiDBLite consensus disorder prediction 264 289 - -
Prci14g2059 317 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 237 IPR027725 -
Prci14g2059 317 FunFam Heat stress transcription factor B-4 17 115 - -
Prci14g2059 317 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci14g2059 317 Gene3D - 17 115 IPR036388 -
Prci14g2059 317 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Prci14g2059 317 Coils Coil 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2059 Prci-Chr14 27895908 27897589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2059 1 317 HSF AT5G62020 47.788 4.13e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci14g2059 HSF_DNA-bind 3.1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2059 K09419 - gmx:100780987 405.986