Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2043 ATGCATAGATCTCTCATGTTGGATAGTTCAACTTCAGAATGTGGGCAAATCCATATCGTGTGTGAAGGAGAAAGTCTACCTCACGGGTCTCTTTCACCGCATCAGAGCGCTCATTGCTTTGAATTGCAGCCTAATTTTTGTCACAGTGTCTCTTTTACTGGTCGTTCTGCGCTTTCTGAATGTTGTTGGTTTGACAGTATCCGGCCATATCCATTCACATACTGTGCCCTTTGCTATTTCTTAGATGGATCAATTCCTGCTATCAAGTTATCAACTTATAGGCAACGATTAAACTCTGGAAAAGATGTAGCACAAAATGAAAGCAACTTACAGAAAGTGTCTTCTTTACCGAGGAACAGGGGATCTGAGTTTTCGTGCATGATAAAAGAGGCTCACATCTTGGGGATGGCTCTTGGTATCCCATGTCTGAATGGGATTGAAGAAGGTGAAGCTCAATGTGCTTTGTTGAACTCTGAATTATTGTGTGATGGATGTTTCAGTTCAGATTCAGATATCTTTCTTTTTGGTGCCAGGACAGTGTATAGGGATATTTGCCTTGGAGATGGTGGATATGTTGTTTGCTATGAGATGGAAGACATTGAAAGGAAACTTGGATTTGGAAGGGACTCATTGATTGCTCTTGCCTTACTTCTTGGGAGTGACTATAGTCAAGGAGTTTATGGTCTAGGTCCGGAGCTTGCTTGTCAGATAGTTAGGTCAATTGGCGACAAATGTGTGCTCCAAAAATTTGCTTCTGAAGGAATTGAATGTCTGAAAACACTGAAAGGCGCAAAGAAGATGGGGCAAGTTTTCAAGAACAATAAAGAAAATATGTTGGACCATGATATGGCATTGAGTCATGGAGGCAAGAACAATTCACAAAGAGATTATAACTTCTTGCAAGTTATCAATGCTTATGTGAAGCCGAAGTGCCACCCAGCAGATTCTGATATTGTGATGAGGGTTCTTGCTCAGTATCCATTTCAACGCAGTAAACTCCAACAGATATGTGCTGAATTCTTTCAGTGGCCTCCGGAGAAAACAGATGAATATATCCTTCCAAAAATAGCTGAAAGGGATTTACGGCGATTTGCCAATTTGCGCTTAACTTCATCACAAGTAGGAGTGAATCTTCCTTTGAATGAGATCCCTGTGAAGTGTCCTGTCTCGGAAATCATAAAGTGCCGAAAAGTTCAAGGAAGAGAATGCTACGAGGTGTCATGGAATGAAATGGATGGACTTGGAACTTCAATAGTACCGGCTGATCTTTTAAAAAGTGCTTGTCCTGAGAAGATTCTAGAATTTGAGGAGAAAAAGTGTTGGCTTAAGAAACAAAATATTCAGAAAAGAAGGCCAAAGAAATCAGAAACTGCATCTTCTATGATTGAACTTGACCTGAGACTCACGAATCTGTCACTGGATGTCAATCTGGTAGACCATGCCAGTCACAAGACATCTGATTCATCAGAGCAGGTATTTCATGATGCATCTGCCATGGAAGAAGCTGATCTGAATAGCAGAAATTTGTCGTATTCATCACATGATGAACAGATTGAATGGGATCAGAATGTGAGGGACACATATGGCAATCAGCAGCAGGGTGATTCCATGGCAAAATATGAGGTCATTGACTTACTGAGTCCTTCCCCACCTAAGCAGTCATGTGCTTCCTCCAGGTGCGCACAGTCTAATGGTGAACATATTGAAGTGATAAATTTGAGTGACTCAGATAGTGACACGTCACCTGAACATAAGAGGAAAGCCAAGGAGCTGAGATTGTTCTTAGCAGGAATTAGGGATGACCTCCATTGA 1812 0.4139 MHRSLMLDSSTSECGQIHIVCEGESLPHGSLSPHQSAHCFELQPNFCHSVSFTGRSALSECCWFDSIRPYPFTYCALCYFLDGSIPAIKLSTYRQRLNSGKDVAQNESNLQKVSSLPRNRGSEFSCMIKEAHILGMALGIPCLNGIEEGEAQCALLNSELLCDGCFSSDSDIFLFGARTVYRDICLGDGGYVVCYEMEDIERKLGFGRDSLIALALLLGSDYSQGVYGLGPELACQIVRSIGDKCVLQKFASEGIECLKTLKGAKKMGQVFKNNKENMLDHDMALSHGGKNNSQRDYNFLQVINAYVKPKCHPADSDIVMRVLAQYPFQRSKLQQICAEFFQWPPEKTDEYILPKIAERDLRRFANLRLTSSQVGVNLPLNEIPVKCPVSEIIKCRKVQGRECYEVSWNEMDGLGTSIVPADLLKSACPEKILEFEEKKCWLKKQNIQKRRPKKSETASSMIELDLRLTNLSLDVNLVDHASHKTSDSSEQVFHDASAMEEADLNSRNLSYSSHDEQIEWDQNVRDTYGNQQQGDSMAKYEVIDLLSPSPPKQSCASSRCAQSNGEHIEVINLSDSDSDTSPEHKRKAKELRLFLAGIRDDLH 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2043 603 SUPERFAMILY PIN domain-like 77 221 IPR029060 -
Prci14g2043 603 Gene3D - 67 205 - -
Prci14g2043 603 Gene3D - 207 273 - -
Prci14g2043 603 SMART xpgineu 136 206 IPR006086 GO:0004518
Prci14g2043 603 FunFam Flap endonuclease GEN-like 1 206 263 - -
Prci14g2043 603 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 78 572 IPR006084 -
Prci14g2043 603 SMART HhH_4 208 241 IPR008918 GO:0003677|GO:0003824
Prci14g2043 603 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 206 367 IPR036279 -
Prci14g2043 603 Pfam XPG I-region 139 221 IPR006086 GO:0004518
Prci14g2043 603 SUPERFAMILY Chromo domain-like 388 440 IPR016197 -
Prci14g2043 603 CDD H3TH_XPG-like 209 252 - -
Prci14g2043 603 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 156 176 IPR006084 -
Prci14g2043 603 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 77 96 IPR006084 -
Prci14g2043 603 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 211 226 IPR006084 -
Prci14g2043 603 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 135 152 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2043 Prci-Chr14 27756080 27764065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2043 78 242 Core DNA Replication Machinery Family AT5G26680 26.705 2.14e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2043 K15338 - qsa:O6P43_008236 714.146