Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2035 ATGGGGAGGCAGCCAGCAGATAAGGCAAAACCAAAACACAGGAAGGGGTTATGGTCACCTGAAGAAGACAATAAGCTCATAAACTACATCCTCAAGCATGGCCATGGCTGCTGGAGCTCTGTTCCCATTAAAGCAGGCTTGCAGAGGAATGGGAAGAGTTGCAGATTAAGGTGGATCAACTATCTAAGGCCAGGATTGAAGAGAGGGATGTTTAGCAAACAAGAGGAGGAGACAATCTTGACTCTTCACCACATGTTGGGCAACAAGTGGTCACAGATAGCACAGCAGTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAGTCAGAAGAAATAAAATCTCAAAATAATAAACAAATGCAGCATGCTAGTTCAAGCTCAGATACCTTTGATTCCTCTTCACCATTAAGTCAAAAACCAGCAATTCCAACCTCTGATCACTTCTCTTCTTTGCAAAACTATAACTTCATCAAAGAGGCTACTCAGAGCTCCTTACCAAAACTTCTATTTGCTGAGTGGCTTTCGCTAGATCGAGCCAACAGTGGGATCCCTGCAAATGCTGGTGATGACCCTTTTGTGTTTGGAAATGAAAGTTTTGATCAATACTCTGATTTCCATGAAGTCGCAATGCATGGAGTATCAGAAGGAGGAACCTATGGAGGAGAGTTCCTTAATTATCTAACGACCACAGATGCAGCAGCAGCAGCTACTGAAGTGTTCAATGCACAGTTCAAGATAGCAAATCAAATGGCGGGAAATGGGGTCATCCATTTCCCAAGTTTCAGCATGAACAATGATGAAATGTACATATAG 846 0.4255 MGRQPADKAKPKHRKGLWSPEEDNKLINYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHMLGNKWSQIAQQLPGRTDNEIKNHWHSYLKKKVAKSEEIKSQNNKQMQHASSSSDTFDSSSPLSQKPAIPTSDHFSSLQNYNFIKEATQSSLPKLLFAEWLSLDRANSGIPANAGDDPFVFGNESFDQYSDFHEVAMHGVSEGGTYGGEFLNYLTTTDAAAAATEVFNAQFKIANQMAGNGVIHFPSFSMNNDEMYI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2035 281 MobiDBLite consensus disorder prediction 120 155 - -
Prci14g2035 281 Gene3D - 70 141 - -
Prci14g2035 281 CDD SANT 18 62 IPR001005 -
Prci14g2035 281 CDD SANT 71 113 IPR001005 -
Prci14g2035 281 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci14g2035 281 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Prci14g2035 281 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Prci14g2035 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci14g2035 281 FunFam MYB transcription factor 70 143 - -
Prci14g2035 281 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Prci14g2035 281 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Prci14g2035 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Prci14g2035 281 MobiDBLite consensus disorder prediction 124 155 - -
Prci14g2035 281 PANTHER MYB DOMAIN PROTEIN 55 1 166 - -
Prci14g2035 281 SMART sant 67 115 IPR001005 -
Prci14g2035 281 SMART sant 14 64 IPR001005 -
Prci14g2035 281 Gene3D - 15 67 - -
Prci14g2035 281 FunFam MYB transcription factor 12 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2035 Prci-Chr14 27707905 27710337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2035 6 221 MYB Transcription Factor Family AT5G52260 50.442 5.10e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci14g2035 Myb_DNA-binding 5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2035 K09422 - qsa:O6P43_008229 339.347