Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2029 ATGGGGAGGTCACCATGCTGCGATAAATATGGAGTGAGAAAGGGAGCTTGGACTCCTGAAGAAGATCAACTCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAGTTGGCGTACGCTACCCAAGAACGCAGGTCTACTTCGATGTGGAAAAAGTTGCCGACTTCGGTGGATAAACTATCTTCGTCCTGACATCAAGCGTGGCCCTTTTACTGGTGAAGAAGAAAGTAAAATTATTCAACTTCATGGCATGCTTGGCAACAGGTGGGCTGCTATAGCATCTCATTTATCTGGAAGAACGGACAATGAAATTAAGAACTATTGGAACACCCATCTGAAGAAGCGCTCCCTTCACTCAGGTCATTCTCTGGAGGCACAAGAGCCCTCTTTCGGTCCTCGTCAAAGTGATATGAAATCCGAATCTTCTTCTGTACGTCACGTAATCCAGTGGGAAAAGGCCAGGGTTGAGGCAGAAAAAAGGCTGTCAATGGAATTGGAAACCTCGTGTCTTAATCATTGTTCTAAAACAAACACACATTCTGATTGCTTTCTTCGACTTTGGCATTCTGAGGTTGGACAATCATTTCGCATGATCACAGAAAAGAAAGCAGAAAGCGAAAGCCCTACCTCGCAATCAAGCATTGCCTTTGCCAACTTGGCTATAGAACAAGTAAGCAGCTGCAACCCAAAGCTTGAAGGTGGAACAGCTGGGTCAGACTCAGGGTCTCATGAATTTCTTGATGCCTCTGATTCTGCATTAAAGCTCCTGCTAGATATGCATGATGACAGTGTAGGATTCTTTGAAGGATTGGAACAGACTGAGAATTTCCATGGTCATCTGCATGATAGATATGACTAA 858 0.4441 MGRSPCCDKYGVRKGAWTPEEDQLLVQYIKKHGCGSWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTGEEESKIIQLHGMLGNRWAAIASHLSGRTDNEIKNYWNTHLKKRSLHSGHSLEAQEPSFGPRQSDMKSESSSVRHVIQWEKARVEAEKRLSMELETSCLNHCSKTNTHSDCFLRLWHSEVGQSFRMITEKKAESESPTSQSSIAFANLAIEQVSSCNPKLEGGTAGSDSGSHEFLDASDSALKLLLDMHDDSVGFFEGLEQTENFHGHLHDRYD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2029 285 FunFam Myb transcription factor 11 67 - -
Prci14g2029 285 CDD SANT 69 112 IPR001005 -
Prci14g2029 285 MobiDBLite consensus disorder prediction 128 143 - -
Prci14g2029 285 CDD SANT 16 61 IPR001005 -
Prci14g2029 285 Gene3D - 14 66 - -
Prci14g2029 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 212 - -
Prci14g2029 285 Gene3D - 69 115 - -
Prci14g2029 285 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci14g2029 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci14g2029 285 MobiDBLite consensus disorder prediction 118 143 - -
Prci14g2029 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci14g2029 285 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci14g2029 285 SMART sant 13 63 IPR001005 -
Prci14g2029 285 SMART sant 66 114 IPR001005 -
Prci14g2029 285 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci14g2029 285 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci14g2029 285 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2029 Prci-Chr14 27699721 27703237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2029 1 268 MYB Transcription Factor Family AT3G61250 52.878 8.47e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci14g2029 Myb_DNA-binding 4.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2029 K09422 - gmx:100782075 329.717