Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2023 ATGCCTTCTATGGCTCCCTCTAAGAGTCCTAAAGAGAAGGAGAAGAAGATGAAGAACACGATTTTAACTGAGGAAGCATCCATTGGTATGGAGAGCACAAAAAGTTCTAAGCTTACAAGAAATACCAAGGTGTCTGATTCTGACCAAGACGGGTTTTCGGACAAGAAAGCGAAGAAGAAGGAGACCAAAAAGCGTAAATCTTCGGATATTGATGGGGTTGGAGAGAAGAGCGAGAGTAGCTCGGAGTTAGTTGAGCCCGAAAGTTCGAGGGCGAAGAGTCAGGAGAAGAGAAAGAAGAATAAAAAGCCGAAATTCGAGGAACCTGACATGGGAGAGGAAGAGGTTGAGAAGAAGGATCCCAATGCAATTTCGAACTTTCGGATATCGGAGCCCTTGAGGGCCAAGTTGAAGGAGAAAGGGATTGAATCTCTGTTTCCCATTCAGGCAATGACTTTCGATACCATCCTCGATGGATGTGATTTGGTCGGTCGGGCTCGCACTGGTCAGGGTAAGACTTTGGCTTTTGTGTTGCCCATGTTAGAGTCTTTAGCCAATGGTTCAGCGAAAACAGCCAGAAAGATTGGATATGGGAGGTCTCCAAGCGTTCTTGTGCTCTTACCTACTAGGGAATTGGCCTCTCAGGTGTTCTCTGATTTTGAAATTTATGGTGAGGCATTGGGTTTGATTTCTTGCTGTTTGTATGGTGGAGCTCCATATCAAGCTCAAGAAATTAAGCTCAAGCGAGGTGTTGATATTGTTATTGGAACACCAGGCCGCATAAAGGATCATATAGAGAGACAAAATATTGACCTAACCCAACTAAGGTTCCGTGTCCTTGATGAGGCAGATGAGATGCTGAGGATGGGTTTTGTTGAAGATGTTGAACTCATTTTGGGTAAGGTTAAAGATGTTAGTAAAGTTCAGACACTTCTATTCAGTGCTACTTTGCCAGACTGGGTCAAGCATATTTCCTCAAAGTTTTTGAAATCAGATAAGAAAAATGTTGACCTTGTTGGGAATGAGAAAATGAAGGCTAGCACCAATGTTAGGCATATTGTTCTTCCATGTACAAGTTCTGCCAGGTCCCAGCTTATCCCAGACATTATTCGCTGCTATAGCAGTGGAGGCCGGACAATTATATTTACTGAGACAAAGGAGTCAGCTTCTGAGCTTGCAGGGCTTTTGCCTGGAGCTCGAGCTCTACATGGTGACATACAGCAAGCGCAACGTGAGGTCACATTGTCTGGCTTTAGGTCTGGGAAATTCATGACATTAGTGGCCACAAATGTGGCAGCTCGGGGTTTAGATATTAATGACGTTCAGTTAATTATTCAGTGTGAACCTCCGCGTGATGTAGAAGCCTATATTCATCGTTCTGGCCTCACAGGACGAGCAGCCAATACTGGGGTTGCTGTTATGCTTTATGATCCAAGAAGGTCAAATATATCTAAAATTGAAAGAGAATCAGGTGTGAAATTTGAACACATATCTGCTCCTCAGCCTGCTGATATTGCAAAAGCTGTTGGTGGGGATGCTGTTGAAATGATAAACCAAGTATCCGACAGCGTGATTCCTGCATTCAAAGCTGCTGCTGAGGAGCTTGTGAACAACTCTGGTTTAACAGCCGTTGAATTACTTGCAAAAGCTCTTGCCAAGGCTGTTGGTTATACTGAGATAAAGAAAAGATCACTTCTTACTTCCATGGAGAATTATGTCACGTTACTTCTTGAGATTGGAAGACCCATCTTCACCCCATCTTTTGCATATGGAATCCTCAGGAGATTTCTTCCCGAGGAGAAAGTTGAGGCAGTGAAGGGCCTTACTCTGACTGCAGATGGAAATGGCTCTGTTTTTGATGTGCCAGCTGAAGATTTAGATACATATCTTGCTGGTCAGGAAAATGCTGCTAATATAAGCTTAGAAGTATTACAAGAATTGCCACGTTTGCAAGAAAGAGACCAATCAAGAGGGGGTAGATTTGGTGGCGGTGGTCGTGGTGGGTTTGGTAATAATAGAAGTAGTGGCGGTGGAAACAGGTTTTCTGGTGGAAGAGGAGGCGGCAGGAACGGTGGTTTCTCAAATCAGAGGAGTGATCAGTTTTTCGGCGGTTCTAATGGCGGGAGAGGCCGTGGTGGCAATAGAGGGGGAAACAGATGGTAG 2160 0.444 MPSMAPSKSPKEKEKKMKNTILTEEASIGMESTKSSKLTRNTKVSDSDQDGFSDKKAKKKETKKRKSSDIDGVGEKSESSSELVEPESSRAKSQEKRKKNKKPKFEEPDMGEEEVEKKDPNAISNFRISEPLRAKLKEKGIESLFPIQAMTFDTILDGCDLVGRARTGQGKTLAFVLPMLESLANGSAKTARKIGYGRSPSVLVLLPTRELASQVFSDFEIYGEALGLISCCLYGGAPYQAQEIKLKRGVDIVIGTPGRIKDHIERQNIDLTQLRFRVLDEADEMLRMGFVEDVELILGKVKDVSKVQTLLFSATLPDWVKHISSKFLKSDKKNVDLVGNEKMKASTNVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASELAGLLPGARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGLTGRAANTGVAVMLYDPRRSNISKIERESGVKFEHISAPQPADIAKAVGGDAVEMINQVSDSVIPAFKAAAEELVNNSGLTAVELLAKALAKAVGYTEIKKRSLLTSMENYVTLLLEIGRPIFTPSFAYGILRRFLPEEKVEAVKGLTLTADGNGSVFDVPAEDLDTYLAGQENAANISLEVLQELPRLQERDQSRGGRFGGGGRGGFGNNRSSGGGNRFSGGRGGGRNGGFSNQRSDQFFGGSNGGRGRGGNRGGNRW 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2023 719 MobiDBLite consensus disorder prediction 41 57 - -
Prci14g2023 719 MobiDBLite consensus disorder prediction 1 118 - -
Prci14g2023 719 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 152 334 IPR014001 -
Prci14g2023 719 FunFam DEAD-box ATP-dependent RNA helicase 7 572 644 - -
Prci14g2023 719 Pfam DEAD/DEAH box helicase 145 322 IPR011545 GO:0003676|GO:0005524
Prci14g2023 719 Gene3D - 344 572 IPR027417 -
Prci14g2023 719 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 363 505 IPR001650 -
Prci14g2023 719 Gene3D - 573 645 - -
Prci14g2023 719 Pfam Helicase conserved C-terminal domain 368 465 IPR001650 -
Prci14g2023 719 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 48 535 - -
Prci14g2023 719 SMART ultradead3 140 352 IPR014001 -
Prci14g2023 719 MobiDBLite consensus disorder prediction 651 719 - -
Prci14g2023 719 SMART helicmild6 389 466 IPR001650 -
Prci14g2023 719 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 278 286 IPR000629 -
Prci14g2023 719 Gene3D - 68 336 IPR027417 -
Prci14g2023 719 MobiDBLite consensus disorder prediction 25 40 - -
Prci14g2023 719 Pfam GUCT (NUC152) domain 555 650 IPR012562 GO:0003723|GO:0004386|GO:0005524
Prci14g2023 719 MobiDBLite consensus disorder prediction 64 118 - -
Prci14g2023 719 CDD DEADc 132 329 - -
Prci14g2023 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 478 IPR027417 -
Prci14g2023 719 MobiDBLite consensus disorder prediction 688 702 - -
Prci14g2023 719 CDD SF2_C_DEAD 349 475 - -
Prci14g2023 719 CDD GUCT_RH7_like 562 647 - -
Prci14g2023 719 SUPERFAMILY RNA-binding domain, RBD 559 642 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2023 Prci-Chr14 27649805 27655505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2023 158 505 Eukaryotic Initiation Factors Gene Family AT1G72730 30.028 2.06e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2023 K16911 - qsa:O6P43_005503 966.452