Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2013 ATGGAAGATTGGCTTGTGCTGTTCTGTTTGCAGAAGCAGAAAAGGAATAATCTTTTTGTAGTAATGGCGGTTTTCTTTCTCCTCTCTCCATTTGCCTCCTCCATTAGCCAGGAAGGACAAGCATTAATGGAGATTAAAGCTTCCTTCAGCAACATGGCAGATATTTTGCTAGACTGGGATGACTTGCACAACGATGACTTCTGTTCATGGCGTGGAGTTTACTGTGATAATTTAACTCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAATCTGGGTGGGGAAATATCTCCAGCCATTGGCGATTTGACAAACTTGCAATCCATTGATCTCCAAGGAAATAAACTAACTGGTCAGATTCCAGATGAAATTGGGAACTGTGCTGCACTTGTTCATCTGGATTTGTCTGATAATCAACTATATGGTGACATACCCTTCTCGATATCGAAGCTAAAGCAACTTGAGTTTTTGAACTTGAAGAATAATCAGCTGAGCGGGCCTATTCCTTCAACATTAACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCACAATCTGCTCACTGGCGAGATACCAAGACTCCTTTATTGGAATGAAGTCTTGCAATACCTAGGGTTGAGAGGAAACATGTTGAGTGGAGCTCTATCCCCAGATATCTGTCAATTAACTGGACTGTGGTATTTTGATGTGAGGGGCAACAACTTGACGGGCACAATGCCTGAAACCATTGGGAACTGTACAAGTTTTCAGATTCTGGATATATCATATAACCAGATTACTGGGGATATCCCCTACAATATTGGATTTCTGCAAGTGGCAACTTTGTCTCTTCAAGGGAATAGACTAACTGGAAGGATTCCGGAAGTGATTGGTTTAATGCAAGCCCTTGCTATCTTGGACTTGAGTGAGAATGAACTGGTGGGACCCATTCCTCCAGTACTTGGCAATTTATCTTTCACGGGCAAGCTGTATCTCCATGGAAACAAGCTCACTGGTCCAATACCTCCTGAACTAGGCAATATGTCTAAGCTGAGTTACCTGCAATTGAATGGCAATAAACTAGTTGGCAGGATTCCTGAGGAATTTGGAAAGCTTGAGCATTTGTTTGAATTGAATCTTGCTAACAATTATCTTGAAGGATCTATTCCACATAACATAAGCTCCTGTACTTCATTGAATAAGTTTAATGTGCATGGTAATCGCTTAAGCGGTTCTATTCCTTTGAGCTTCCGCAGCCTTGGGAGTCTGACTTACTTAAATCTCTCAGAAAACAACTTGAAAGGGAATATACCTATTGAGTTGGGCCACATCATAAATCTTGATACACTGGATCTATCTCGCAACAATTTTTCAGGGCAGGTTCCAGCATCTGTTGGTTATCTGGAACATCTTCTGACACTTAACTTGAGCCACAACCATTTTACTGGTCCCTTGCCTGCTGAGTTTGGGAATCTGAGAAGCATCCAGATTATTGATATGTCTTTCAACAATCTATCAGGTGGCATCCCTCCTGAAATCGGGCTGCTGCAGAACCTTGTTTCACTGATTCTGAACAACAATGACTTGCATGGGGAGATTCCAGACCAGTTAACAAACTGCTTCAGTCTTTCCTCCCTGAATGTCTCTTACAATAACTTGTCTGGAACAATTCCTCCTATGAAGAACTTCTCACGATTTTCATCTGACAGCTTCATTGGAAATCCCTTGTTATGCGGAAATTGGTTAGGATCAATATGTGATCCTTACATGCCAAATTCTAGTGTAACTTTTTCTAGGGCTGCAATTGTTTGTCTCACACTTGGGATCCTCACATTGTTGGCCATGGTAATAGTTGCAATGTACAGATTGAGCCAATCCATGCAATTGATGAAGAGATCCAGAGGAACTGGGCAAGGTTCCCCTAAACTTGTCGTTCTTCACATGGATATGGCAATGCACTCCTATGATGATATAATGAGAAGTACAGAGAACCTAAGTGAGGAGTATATCATAGGATATGGTGCATCTAGTACAGTGTACAAATGTACTCTGAAGAATTCTCGACCGATTGCGATCAAGCGACTATACAACCAGCATCCAAACAACACAAGGGAGTTTGAAACAGAACTTGAAACCATTGGCAGCATAAGACATAGAAACCTTGTTACCTTGCATGGTTATGCACTGACACCAAATGGAAACCTCCTTTTCTATGACTATATGGAAAACGGCTCTCTGTGGGATCTTCTTCATGGTCCCTCGAAGAAGGTAAAACTTGACTGGGAAACACGCATAAGGATTGCTGTGGGAGCTGCAGAGGGACTTGCTTATCTCCACCATGGCTGCAGCCCTCGAATTATTCACAGGGATATAAAGTCTTCAAATATTCTACTAGATGAGAACTTTGAGTCTCATCTCTCTGATTTTGGCATTGCCAAATGTATCTCAACCACAAGAACTCATGCATCAACACATGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCAGACATCTCGCCTGAATGAAAAGTCAGATGTATACAGCTTTGGCATAGTTCTACTTGAGCTACTTACTGGGAAGAAAGCAGTGCACAACGAGTCCAACTTGCATCATTTGATACTGTCCAAGACAGATAATGACACTGTGATGGAGGCTGTAGATCCTGAAGTTTCTGTTACCTGCATAAATCAAGCCCATGTGAGGAAGACCTTTCAGCTCGCACTGCTTTGCACAAGAAGAAATCCATCTGAGAGGCCTACCATGCATGAGGTTGCCAAGGTGTTGGTCTCTCTTCTTCCTGCACCTCCCAGCAAAACATTTGCCTCGCCAGCAAAGACCATCGATTATGCACGATTTGTGATCGAGAAGGGGCAACGATGTCCAAAAATGGAACTGCTACAACATCAACAACACAACAATTCGTGTGATGCTCAATGGTTCATTCGCTTCGGGGATGCTATATCCAAGAACACCCTCTAA 2970 0.4232 MEDWLVLFCLQKQKRNNLFVVMAVFFLLSPFASSISQEGQALMEIKASFSNMADILLDWDDLHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLTNLQSIDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLSGPIPSTLTQIPNLKTLDLAHNLLTGEIPRLLYWNEVLQYLGLRGNMLSGALSPDICQLTGLWYFDVRGNNLTGTMPETIGNCTSFQILDISYNQITGDIPYNIGFLQVATLSLQGNRLTGRIPEVIGLMQALAILDLSENELVGPIPPVLGNLSFTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNGNKLVGRIPEEFGKLEHLFELNLANNYLEGSIPHNISSCTSLNKFNVHGNRLSGSIPLSFRSLGSLTYLNLSENNLKGNIPIELGHIINLDTLDLSRNNFSGQVPASVGYLEHLLTLNLSHNHFTGPLPAEFGNLRSIQIIDMSFNNLSGGIPPEIGLLQNLVSLILNNNDLHGEIPDQLTNCFSLSSLNVSYNNLSGTIPPMKNFSRFSSDSFIGNPLLCGNWLGSICDPYMPNSSVTFSRAAIVCLTLGILTLLAMVIVAMYRLSQSMQLMKRSRGTGQGSPKLVVLHMDMAMHSYDDIMRSTENLSEEYIIGYGASSTVYKCTLKNSRPIAIKRLYNQHPNNTREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPSKKVKLDWETRIRIAVGAAEGLAYLHHGCSPRIIHRDIKSSNILLDENFESHLSDFGIAKCISTTRTHASTHVLGTIGYIDPEYAQTSRLNEKSDVYSFGIVLLELLTGKKAVHNESNLHHLILSKTDNDTVMEAVDPEVSVTCINQAHVRKTFQLALLCTRRNPSERPTMHEVAKVLVSLLPAPPSKTFASPAKTIDYARFVIEKGQRCPKMELLQHQQHNNSCDAQWFIRFGDAISKNTL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2013 989 SUPERFAMILY L domain-like 315 573 - -
Prci14g2013 989 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Prci14g2013 989 SMART LRR_typ_2 510 534 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 414 438 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 294 318 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 223 247 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 462 485 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 175 199 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 366 390 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 342 365 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 151 174 IPR003591 -
Prci14g2013 989 SMART LRR_typ_2 103 127 IPR003591 -
Prci14g2013 989 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524
Prci14g2013 989 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 199 - -
Prci14g2013 989 SUPERFAMILY L domain-like 35 331 - -
Prci14g2013 989 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 174 925 - -
Prci14g2013 989 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 200 309 - -
Prci14g2013 989 ProSiteProfiles Protein kinase domain profile. 659 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2013 989 Gene3D Phosphorylase Kinase; domain 1 620 734 - -
Prci14g2013 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 630 734 - -
Prci14g2013 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Prci14g2013 989 SUPERFAMILY Protein kinase-like (PK-like) 638 925 IPR011009 -
Prci14g2013 989 Pfam Leucine rich repeat 440 499 IPR001611 GO:0005515
Prci14g2013 989 Pfam Leucine rich repeat 344 403 IPR001611 GO:0005515
Prci14g2013 989 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Prci14g2013 989 Gene3D Ribonuclease Inhibitor 35 200 IPR032675 -
Prci14g2013 989 Gene3D Ribonuclease Inhibitor 201 289 IPR032675 -
Prci14g2013 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 735 936 - -
Prci14g2013 989 Gene3D Ribonuclease Inhibitor 293 583 IPR032675 -
Prci14g2013 989 Pfam Protein kinase domain 662 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2013 989 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Prci14g2013 989 Gene3D Transferase(Phosphotransferase) domain 1 735 936 - -
Prci14g2013 989 SMART serkin_6 659 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g2013 989 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 310 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2013 Prci-Chr14 27576946 27585320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g2013 105 989 Receptor kinase-like Gene Family AT5G07180 75.141 0.0 1347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Prci14g2013 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2013 K20718 - qsa:O6P43_005490 1620.91