Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1999 ATGGAGGAAAAGGAGAGTTTTGCTTCTGGGTTTGTGCTGAAGGATAACGATGCCCCGGACAGCTTCCATGTAGCTCCGAGGAATGAAAACTCCGGTCAGTTCCCCGGCGGGACCGAACCTGCGGCTCAGGCACCTGTAAGTGCTCCAGCGACAGTGATGGGGACCGTGACTTCAGGTACGAATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGGTCCTGATGGAATGGCGTTGGCGTTGTCTCCGATGCCGATTTCGTCGTCAATTCCGTTGACCGGTGACTTCTCGGGTTGGAAGAGGGGTCGAGGGCGCTCTGTTGAATCGATGAAGAAGTCGTTTAATAAGTGTGACTTGGAAAGCTCAGGACCAGGTAATGGACTTGCATACTCGGTTGGTGCCAATTTTACACCCCATATACTCATAGTTAATGCTGGCGAGGATGTTAACATGAAGGTTATGTCCTTCTCTCAACAAGGATCCCGAGCCATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAACACTTCGACAACCAACTTCCTCTGGTGGTACTTTAACATATGAGGGACGATTTGAGATTCTTTCTTTGTCTGGTTCATATATGCCAACTGAAAACGGAGTGGCAAGGAGCAGATCTGGTGGAATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTGGTTGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCAGGCCCTGTACAGGTTGTCGTGGGCAGTTTCCTTCCAGGTCACCAGCAGGAGCACAAAAACAAGAAGCAGAAGATGGAGTTTATATCTACCATCACACCTCCCCATTTTAGTCCTGTCTCTGATCAAGAATTGTATGTTAGTTTTGGAGGAGTAAAGCCTATTCTAACACCTGCTGCTTTTCAAGGAGACAATGTTACTTGTTTTAACAATGTACAAGGCTCTAGGGACTCCTCGGCATCACCTTTTCCTGAAAAGGAGTCTAATGCCAGCCTATCAAATGCTGGGATTCCTAGTTAA 1020 0.4794 MEEKESFASGFVLKDNDAPDSFHVAPRNENSGQFPGGTEPAAQAPVSAPATVMGTVTSGTNVKKKRGRPRKYGPDGMALALSPMPISSSIPLTGDFSGWKRGRGRSVESMKKSFNKCDLESSGPGNGLAYSVGANFTPHILIVNAGEDVNMKVMSFSQQGSRAICILSANGMISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGVARSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQEHKNKKQKMEFISTITPPHFSPVSDQELYVSFGGVKPILTPAAFQGDNVTCFNNVQGSRDSSASPFPEKESNASLSNAGIPS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1999 339 Gene3D - 138 271 - -
Prci14g1999 339 FunFam AT-hook motif nuclear-localized protein 1-like 138 268 - -
Prci14g1999 339 MobiDBLite consensus disorder prediction 1 47 - -
Prci14g1999 339 MobiDBLite consensus disorder prediction 313 339 - -
Prci14g1999 339 CDD DUF296 137 251 IPR005175 -
Prci14g1999 339 ProSiteProfiles PPC domain profile profile. 133 275 IPR005175 -
Prci14g1999 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 40 302 IPR039605 GO:0003680
Prci14g1999 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 264 - -
Prci14g1999 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1999 Prci-Chr14 27477726 27484318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1999 57 268 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 64.706 1.96e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1999 - - pcin:129313186 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1999 14 27477726 27484318 Prci1g1489 1 33707682 33712676 CCT
Prci14g1999 14 27477726 27484318 Prci1g1489 1 33707682 33712676 ECH
Prci14g1999 14 27477726 27484318 Prci14g1999 14 27477726 27484318 ECH