Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1987 ATGGGATTTTCTTTTTCACCACTTACTTTTCTTATCTCTCTCCTAGTTTTTGCTCTCCTGAACCCGAAATGGGTTTGTGGGGACGCAGAGGTAGGAGCCCTTATGGATATCAAAGCCGCTCTGGACCCAGAAAGCCATTATCTATCCTCGTGGACTGTTAATGGAAAACCATGTGATGGTTCGTTTGAAGGAGTGGGTTGTAATGAGAAGGGTCAAGTATCTAACATTTCGTTGCAGGGAAAAGGTCTCTCTGGAAAGCTCTCACCTGCCATTGCAGAGCTCAAGCAACTTACAGGACTTTACTTGCATTATAACACCTTGCAGGGAACTATTCCCGGAGAAATTGCCAACTTGACTAACCTCAGTGACTTGTATTTGAATGTGAATAATCTGTCAGGTGAAATCCCTCCTGAGATAGGCAAAATGGAGAACCTGCAGGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCGTACCTACACAGCTCGGTGCATTGAAGAAGCTTGTAGTTCTTGCTCTGCAGTCAAATCAATTATCAGGTGCCATCCCTGCAAGTTTAGGTGATTTGGGAATGCTAATGAGGCTTGATCTAAGCTCTAATCACCTCTTAGGCTCACTTCCCTCTACACTAGCTGATGCTCCTTCACTGCGAGTTCTAGATGTTCGCAACAACACCCTCTCTGGAAATGTACCTCCTGCTCTGAAGAGGCTAGATGATGGATTTTTGTATGAGCACAATCTGGGATTATGTGGAGTTGGGTTTTCATCCTTGAAAACCTGCAATGCTTCAGATCATAGTAATCCCGAGAGACCAAATAAACCTTATGGAGCAGGTTTTGGTGGTACATCAGCGAAAGTTATACCAGAAACTGCAAATGTGCCACTTCGTTGCAATGGAACTCAGTGCCAGAGTTCATCGAAACCCAAACAATCAGCATCTATCATTGTTGGCATAGTTGTGTTTGCAATTGCAGTGCCAGCAATTGGTGTTCTAACTTTCATGCAATATCGTAGGCGTAAACAAAAGCTCGCAAACTCATTTGATATCTCGGATAATGGTCTGATCATGAACCAAGATAAGGTTATGTACCAGAAAAATGGATCTCCTTTAGTCAGCCTTGAGTACTCTAAGGGCTGGGACCCTTTGGCTGAAAGCCGGAATTTCATGGGGGATAGCCGTGATGTGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTTGAGACTGCTGCTCAGTATTTCTCAGAGTTAAACTTGTTGGGTAAGAGTATCTTCAGTGCAACATACAAGGGAACTTTAAGAGATGGATCTGTTGTTGCCATTAAAAGAATCAGTAAAACAAGCTGTAAGAGTGACGAGTCTGAATTTTTGAAAGGACTACACATTTTGACCTCGCTGAGGAACGAGAACTTGGTGAGGTTGAGAGGATTTTGTTGCTCAAGGGGGCGAGGCGAGTGCTTTCTAGTCTATGATTTTGTCCATAACGGAAATCTCTCGTGCTACCTCGATGTGAAGGAAGGCGAAGAAGTCCTCGAATGGTCAACTAGAGTTTCTATTGTTAAAGGCATAGCTAAAGGAATAGCATATTTACATGCATATAAACCAAATAAGCCAGCCCTTGTTCACCAAAACATCTCGGCTGAGAGAGTGCTCATCGATCAGCGATTCAATCCGATGCTTTCAGATTCTGGCCTTCACAATCTTCTTACTGATGACATTGTCTTCTCAGCACTCAAGGCTAGCGCAGCAAAGGGATATCTAGCTCCTGAATACACGACCACTGGCCGGTTCACAGAGAAAAGCGATGTGTATGCTTTTGGAGTGCTTCTTTTCCAGATCCTCTCAGGGAAAAGGAAGATCACTAGCTCGATGCGCCTTGCTGCAGAATCCTCCAGACTCCAAGCACTCATTGACCCAAATCTTCACGGCAGATTCCTTGAATATGAGGCAGCAAAGCTTGCGAAAATGGCCTTGGTTTGCTCCCATGAGTCTCCTTTGGAGAGGCCATTGATGGAAGCTATTGTTCAAGACCTTGGAAGTTTCAACAGTTGTCTCTGA 2058 0.4417 MGFSFSPLTFLISLLVFALLNPKWVCGDAEVGALMDIKAALDPESHYLSSWTVNGKPCDGSFEGVGCNEKGQVSNISLQGKGLSGKLSPAIAELKQLTGLYLHYNTLQGTIPGEIANLTNLSDLYLNVNNLSGEIPPEIGKMENLQVLQLCYNQLTGSVPTQLGALKKLVVLALQSNQLSGAIPASLGDLGMLMRLDLSSNHLLGSLPSTLADAPSLRVLDVRNNTLSGNVPPALKRLDDGFLYEHNLGLCGVGFSSLKTCNASDHSNPERPNKPYGAGFGGTSAKVIPETANVPLRCNGTQCQSSSKPKQSASIIVGIVVFAIAVPAIGVLTFMQYRRRKQKLANSFDISDNGLIMNQDKVMYQKNGSPLVSLEYSKGWDPLAESRNFMGDSRDVFHSFRFNLEEVETAAQYFSELNLLGKSIFSATYKGTLRDGSVVAIKRISKTSCKSDESEFLKGLHILTSLRNENLVRLRGFCCSRGRGECFLVYDFVHNGNLSCYLDVKEGEEVLEWSTRVSIVKGIAKGIAYLHAYKPNKPALVHQNISAERVLIDQRFNPMLSDSGLHNLLTDDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKRKITSSMRLAAESSRLQALIDPNLHGRFLEYEAAKLAKMALVCSHESPLERPLMEAIVQDLGSFNSCL 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1987 685 SUPERFAMILY L domain-like 28 237 - -
Prci14g1987 685 Gene3D Transferase(Phosphotransferase) domain 1 493 684 - -
Prci14g1987 685 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Prci14g1987 685 FunFam Protein NSP-INTERACTING KINASE 2 140 262 - -
Prci14g1987 685 Gene3D Phosphorylase Kinase; domain 1 385 492 - -
Prci14g1987 685 ProSiteProfiles Protein kinase domain profile. 414 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci14g1987 685 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Prci14g1987 685 CDD STKc_IRAK 420 678 - -
Prci14g1987 685 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Prci14g1987 685 FunFam Protein NSP-INTERACTING KINASE 2 385 492 - -
Prci14g1987 685 Pfam Protein tyrosine and serine/threonine kinase 418 678 IPR001245 GO:0004672|GO:0006468
Prci14g1987 685 FunFam Protein NSP-INTERACTING KINASE 2 493 682 - -
Prci14g1987 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 144 679 IPR046959 -
Prci14g1987 685 Gene3D Ribonuclease Inhibitor 178 242 IPR032675 -
Prci14g1987 685 SUPERFAMILY Protein kinase-like (PK-like) 397 678 IPR011009 -
Prci14g1987 685 FunFam Leucine-rich repeat receptor-like kinase 29 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1987 Prci-Chr14 27411595 27414948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1987 9 526 Miscellaneous Gene Families AT4G22730 55.218 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Prci14g1987 PK_Tyr_Ser-Thr 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1987 - - gmx:100789253 1023.46