Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1953 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGTCTGAGCAAACTAGCTTCAAGGTTGTATTTGACATGTTGATGAAGGAACTCCGGGAACCTGTAGACTTTGAACTTCCAGATTGGTTTAATAAGTCGAAGCCAATGCCCTACATCTCTATAAAACGCAATATATATCGCACGAAGAAGGTCAGGAAACGATTTGATGATGATGATGGCATTTTCTGTTCCTGTGCTCCCTCAGTTGGATCTTCTAGTGTATGTGGTAAAGACTGCCTCTGTGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGAAGCTCCTGCTTGAACAAACCATTCCAGAATCGACCTGTGAAGAAGATGAAATTGGTAGAGACAGAGAAATGTGGCTCGGGAATTGTGGCAGATGAGGATATCGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACATAGGCTTTGGAATATGAAAGCTCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATCGATGGGGAAACAAGAATTGGCATATTTGCAACTCGTCACATTAAAAAGGGGGAACATCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGGGTTCGACCACCCAAACCCAAAATGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGACGTTTGCATACAGGAAGTTCTCATGTTGTTGGTCAACAAAAGCGCTCACACAATTGCATTGGTCAAGTTGTTAGGATAAGTGAGAGGTTTGGGATTATAAGGCGGTTTGATAAATATTCCAAAAAGCATTTGATCATGTTTGAGGATGGCACTGTTCATTCTTGTGACCTATCCGAAGAAGACTGGGAACTTGTGAAACTGTGA 1053 0.4122 MKKVPYVDTEKSEQTSFKVVFDMLMKELREPVDFELPDWFNKSKPMPYISIKRNIYRTKKVRKRFDDDDGIFCSCAPSVGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPVKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEVIDDKECEHRLWNMKARGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRHIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKMASDAALKLVAYQVYQNGRLHTGSSHVVGQQKRSHNCIGQVVRISERFGIIRRFDKYSKKHLIMFEDGTVHSCDLSEEDWELVKL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1953 350 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Prci14g1953 350 SMART PostSET_3 242 258 IPR003616 -
Prci14g1953 350 FunFam Histone-lysine N-methyltransferase 34 274 - -
Prci14g1953 350 ProSiteProfiles Post-SET domain profile. 242 258 IPR003616 -
Prci14g1953 350 PANTHER SET DOMAIN PROTEINS 29 276 - -
Prci14g1953 350 SUPERFAMILY SET domain 16 248 IPR046341 -
Prci14g1953 350 SMART set_7 119 242 IPR001214 GO:0005515
Prci14g1953 350 ProSiteProfiles SET domain profile. 119 236 IPR001214 GO:0005515
Prci14g1953 350 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Prci14g1953 350 Pfam SET domain 130 235 IPR001214 GO:0005515
Prci14g1953 350 Gene3D SET domain 25 273 IPR046341 -
Prci14g1953 350 CDD SET_ASHR3-like 120 258 - -
Prci14g1953 350 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 297 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1953 Prci-Chr14 27080233 27088466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1953 98 257 C2H2 Transcription Factor Family AT2G23740 35.556 2.26e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci14g1953 SET 5.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1953 - - gmx:100808183 568.926