Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1951 ATGGACTCTAGCAATTATCATGTTGAATGTAAAAGGGCAAGCCCTTCTTCTTCTTCAACCATTAATGAAGAGCTTAAAGAACAGAAAAAAAATAGTAGTAAGGTACAAGGAATGCCTCAAGAACCATGCAGCTTCAATGGTGGACATGCAATTGATGGTTGTTGGGGAGTCATTTCTTTAGAAGAAGATGGCTCTCTTGAGGCTTTCAAGTGCTCAGCCTGCAATTGCCACCAGAAACTTCCACAGAAGGAGATTCAATGCTATTATTCAAATTCCTCCTCCTCCAATACTTTCTGTTATAGCTCTGATCAGCATTATCTCACCCCATTGCTTCCAAATACTCCTCAGATCACAAGCCCCATCATTCTGGACCATCTTTTATTGTCTCCCAAAAAAAGTGGGTCAAATCTTTCTGATCAGTCACATGATCGAGATAGTAATAGGGATCATGGGGAAGAAGATCATAGGAATCACTATAAAGAGGTGGGAAAACTAGGAGATGAGAAGGTGACGATGAAGAAGAGGTTTAGGACTAAGTTCAGCGCAGAACAGAAGGAGAAGATGATGAGATTTGCAGAGAAGGTTGGGTGGAAGATTCAGAAGCTTGAAGAATCTGTGGTCCAGAAGTTTTGTGAAGAGATAGGAATCAAGAGAAGAGTCCTCAGAGTTTGGCTGCACAATAACAAGAACACTTATGCCAAAAACTTGCGTACCACTGGTTAA 723 0.4108 MDSSNYHVECKRASPSSSSTINEELKEQKKNSSKVQGMPQEPCSFNGGHAIDGCWGVISLEEDGSLEAFKCSACNCHQKLPQKEIQCYYSNSSSSNTFCYSSDQHYLTPLLPNTPQITSPIILDHLLLSPKKSGSNLSDQSHDRDSNRDHGEEDHRNHYKEVGKLGDEKVTMKKRFRTKFSAEQKEKMMRFAEKVGWKIQKLEESVVQKFCEEIGIKRRVLRVWLHNNKNTYAKNLRTTG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1951 240 Gene3D - 160 235 - -
Prci14g1951 240 MobiDBLite consensus disorder prediction 133 161 - -
Prci14g1951 240 SUPERFAMILY Homeodomain-like 166 234 IPR009057 -
Prci14g1951 240 MobiDBLite consensus disorder prediction 1 22 - -
Prci14g1951 240 MobiDBLite consensus disorder prediction 137 161 - -
Prci14g1951 240 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 35 84 IPR006456 -
Prci14g1951 240 MobiDBLite consensus disorder prediction 1 39 - -
Prci14g1951 240 FunFam Zinc-finger homeodomain protein 2 161 234 - -
Prci14g1951 240 Pfam ZF-HD protein dimerisation region 46 85 IPR006456 -
Prci14g1951 240 NCBIfam homeobox domain, ZF-HD class 173 230 IPR006455 -
Prci14g1951 240 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 46 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1951 Prci-Chr14 27049258 27050229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1951 47 234 ZF-HD Transcription Factor Family AT1G14440 43.085 3.12e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci14g1951 ZF-HD_dimer 4.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1951 - - pcin:129292084 489.189