Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1934 ATGGACACCACGTCCAGGACCATGAGAAGACAAGAAGATGACGACGACGACGACGATGAAGAGTGCAACACCACCAGGAAGCACTCACGCAACAGGTTTCGGTTTCGGCCTCCTTTCTATTTGTGTGTCGCCGAGCCTGATTCTAGTTGGCAAGCCGGAACCTCCGCACACGGCGGCGCCTCCACTGATCTCCGCCGCCGATTCCTGATTCATCCGGAGAACTGGTGGTACGTCGTGTGGAAGCATTTCATTTTGTTATGGGCCGTCTACTCTTCGTTCTTCACTCCTTTGGAGTTTGGATTCTTCAGAGGATTGCCGGAGGAAATCTTCTTGCTCGACATTGCTGGCCAGTTCGCTTTCCTCATTGACATCGTCGTCCGATTCTTCGTCGCCTATCGTGACATCCACTCCTATTGCATGATCTATGATCACACTCAAATTGCTACGAGGTACCTGAAGTCTCGGTTCACAGTTGATTTTCTTAGCTGTTTTCCGTGGGATTATATTTACAAGGCTACTGGGAGGAAAGAAGCCATCAGGTATTTTTTATGGATTAGGCTATGTCGAGCCTGTAGAGTGACTGAGTACTTTGAGAGGCTGGAGAAAGATATTAGGATCAACTACCTCTTTACCAGGATTGCAAAACTTCTTGTTGTTGAACTTTATTGCACCCACACAGCTGCCTGTATCTTCTACTATCTTGCTACCACTTTGCCGCCATCAAATGAAGGTTATACATGGATAGGCAGCTTAAAGATGGGTGATTATAGCTATTCAGACTTTAGACATATCAATCTTTGGAAGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGCAACTGTTGGCTATGGAGACATTCATGCAGTTAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCCTTTGATATGATTCTTGGTGCTTACCTTCTTGGTAATATGACAGCATTGATTGTGAGAGGATCAAAAACAGAGAGGTTTAGGGATAAAATGACTGATATTATTAAGTACATGAATAAAAACAATTTGGACAAGGAGATAACTAAAAAAATAAAAGGCCATTTACGCTTACAGTATCATCGCAGTTACACTGAGGCTGCTGTGCTTCAGGATATTCCAGCCTCTATTCGTGCAAAGATTTCAGTGAATTTGTATGAGCGATTTATGCAAGAAGTTTCTCTTTTCAAGGGATGCTCCTTGGGGTTCATTAAGCAAATTGCAATCAGAGTCCATGAAGAGTTTTTCGTTCCAGGAGAAGTGATTATGGAGCAAGGAAATGTAGCCAATCAACTTTACCTTGTATGTGATGGCAAGCTGGATGAGATAAGGACAGATGATGTTGATAAAGAAGTGCCAATAAGGCTTTTGCAAGCATACTGTTTCTTTGGCGAGGTTTCTTTTCTTTGTGATATACCTCAACCTTCAACCATACGAGCCCGTGAATTTTGCAAGGTTTTGCGACTTGATAAGCATTCCTTTACTGAAACATTGAAGGTATATTTTGCAGATGGCCGAGTTATCTTGAACAATCTCCTTGAGGAAAAAGACTCTGATCTTCAGCGGAAGCTCCTGCAATCGAACTTCTTCTTGACTGTTGAAAACCATGAAACAGAGATGGTTATGAGAATGAATTGTGCTGCATATGAAGGGAACATTCACTTTTTGAAACGTTTGATTGAATCAGGAGTAGATCCCAATAAGACTGATTATGATGATAGATCACCCTTGCTTATTGCTGCATCGCAAGGACATGTAGAAATTGTTCGCTTTCTTGTTGAACGTGGAATAAAAACCAATTTCTCTGATAAATTTGGGAATTCCCCCTTGTTTGAAGCCATCAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTGGATGTGGGGGCAACCCTTACCGTAGATCATCCTGGGAATTTTCTCTGCATGACTGTTGCAAAGAAGGAGTTGAGCCTTCTAAGACGGGTCTTGGATTATGGTATTAATCCAAATGCTAGAAATTATGATCAGCGTACACCTCTTCACATAGCTGCCTCTGAAGGTTTGTGCAAAATGGCTGAGTTGCTTCTAGAAGCAGGAGCAAGTGTTTTATCAAAGGACAGATGGGGAAATACCCCGCTTGATGAAGCTCGTATGGGTGGAAATAAGAATATAATCAAAATGCTCGAAGTTGCAAAAGTTACTCAATTGGCTCTATTATCCCATGGTATACAAGAACCTCGAGCAAAAGTACTATTACTGTCAACAGATGAAATTCCAAGAAAGAAATGCACCGTATTTCCTTTCCATCCATGGGATCAAAAATCGGATAAAAGAGAGGGAGTTGTCTTGTGGGTTCCAAAAACCATTGAAGAACTTGTGCAGGTGGCAATGAAACATCTCAATTCTTCAAGTAGTTCCTCTATTTTATCAGAACATGGGGGTAAAATTCTTGATGTAGACATGATTAGCAATGACGAGAAGCTATTTCTGGTGAGTGAAGCGCAATCAAAGAGTGCATGA 2511 0.4166 MDTTSRTMRRQEDDDDDDDEECNTTRKHSRNRFRFRPPFYLCVAEPDSSWQAGTSAHGGASTDLRRRFLIHPENWWYVVWKHFILLWAVYSSFFTPLEFGFFRGLPEEIFLLDIAGQFAFLIDIVVRFFVAYRDIHSYCMIYDHTQIATRYLKSRFTVDFLSCFPWDYIYKATGRKEAIRYFLWIRLCRACRVTEYFERLEKDIRINYLFTRIAKLLVVELYCTHTAACIFYYLATTLPPSNEGYTWIGSLKMGDYSYSDFRHINLWKRYVTSLYFAIVTMATVGYGDIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVRGSKTERFRDKMTDIIKYMNKNNLDKEITKKIKGHLRLQYHRSYTEAAVLQDIPASIRAKISVNLYERFMQEVSLFKGCSLGFIKQIAIRVHEEFFVPGEVIMEQGNVANQLYLVCDGKLDEIRTDDVDKEVPIRLLQAYCFFGEVSFLCDIPQPSTIRAREFCKVLRLDKHSFTETLKVYFADGRVILNNLLEEKDSDLQRKLLQSNFFLTVENHETEMVMRMNCAAYEGNIHFLKRLIESGVDPNKTDYDDRSPLLIAASQGHVEIVRFLVERGIKTNFSDKFGNSPLFEAIKNGHEEVASLLVDVGATLTVDHPGNFLCMTVAKKELSLLRRVLDYGINPNARNYDQRTPLHIAASEGLCKMAELLLEAGASVLSKDRWGNTPLDEARMGGNKNIIKMLEVAKVTQLALLSHGIQEPRAKVLLLSTDEIPRKKCTVFPFHPWDQKSDKREGVVLWVPKTIEELVQVAMKHLNSSSSSSILSEHGGKILDVDMISNDEKLFLVSEAQSKSA 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1934 836 Gene3D - 511 637 IPR036770 -
Prci14g1934 836 SUPERFAMILY Ankyrin repeat 512 725 IPR036770 -
Prci14g1934 836 Pfam Ankyrin repeats (3 copies) 549 636 IPR002110 GO:0005515
Prci14g1934 836 ProSiteProfiles Ankyrin repeat region circular profile. 608 637 - -
Prci14g1934 836 Gene3D - 78 323 - -
Prci14g1934 836 Pfam Ankyrin repeats (many copies) 660 713 IPR002110 GO:0005515
Prci14g1934 836 ProSiteProfiles Ankyrin repeat profile. 672 704 IPR002110 GO:0005515
Prci14g1934 836 FunFam Potassium channel KAT2 386 522 - -
Prci14g1934 836 MobiDBLite consensus disorder prediction 1 24 - -
Prci14g1934 836 CDD CAP_ED 398 512 IPR000595 -
Prci14g1934 836 Gene3D - 638 734 IPR036770 -
Prci14g1934 836 Pfam Ion transport protein 79 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci14g1934 836 Gene3D Jelly Rolls 386 507 IPR014710 -
Prci14g1934 836 ProSiteProfiles Ankyrin repeat region circular profile. 672 704 - -
Prci14g1934 836 Pfam KHA, dimerisation domain of potassium ion channel 758 827 IPR021789 -
Prci14g1934 836 ProSiteProfiles KHA domain profile. 759 836 IPR021789 -
Prci14g1934 836 ProSiteProfiles Ankyrin repeat region circular profile. 575 607 - -
Prci14g1934 836 PANTHER POTASSIUM CHANNEL AKT1 57 832 IPR045319 GO:0005249|GO:0006813
Prci14g1934 836 SUPERFAMILY cAMP-binding domain-like 326 516 IPR018490 -
Prci14g1934 836 Gene3D Helix hairpin bin 326 385 - -
Prci14g1934 836 SMART ANK_2a 705 734 IPR002110 GO:0005515
Prci14g1934 836 SMART ANK_2a 575 604 IPR002110 GO:0005515
Prci14g1934 836 SMART ANK_2a 608 637 IPR002110 GO:0005515
Prci14g1934 836 SMART ANK_2a 672 701 IPR002110 GO:0005515
Prci14g1934 836 SMART ANK_2a 542 571 IPR002110 GO:0005515
Prci14g1934 836 SMART cnmp_10 398 516 IPR000595 -
Prci14g1934 836 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Prci14g1934 836 PRINTS EAG/ELK/ERG potassium channel family signature 314 323 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci14g1934 836 PRINTS EAG/ELK/ERG potassium channel family signature 270 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci14g1934 836 PRINTS EAG/ELK/ERG potassium channel family signature 113 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci14g1934 836 PRINTS EAG/ELK/ERG potassium channel family signature 222 232 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci14g1934 836 ProSiteProfiles cAMP/cGMP binding motif profile. 398 518 IPR000595 -
Prci14g1934 836 SUPERFAMILY Voltage-gated potassium channels 72 323 - -
Prci14g1934 836 FunFam Potassium channel SKOR 78 323 - -
Prci14g1934 836 Pfam Cyclic nucleotide-binding domain 418 502 IPR000595 -
Prci14g1934 836 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1934 Prci-Chr14 26904149 26915852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1934 8 704 Ion Channels AT5G37500 56.311 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1934 K21867 - qsa:O6P43_005230 1121.69