Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1923 ATGGATGGGGATAATGGCCTTGACATACGAAATTGGGGTTACTATGAACCCACAACTTCCTTTAAGAATCATCTCGGGCTCCAGCTTATGTCGTCAATGCCTGAAAAACCAATGCTTGGAGGGCGCAATGCTTCAGTTTTGTCTGGAAACAATGTGTCATTTCACCATAGGACCATTGGGATGCCACAAGCAACTTACCCCATGGATTACATGAGGGAAGCCTGGATTAGTCAGAGAGAGAAGCTCTTGAACATGATTCCATCTAACCCAGCAAACTATGCTATTATTCCAGAGACATCTTCAGCCCATCACATGCAGTTGGTTCAACCACCTGATTTGGTGAAGGAAGAAAGACCGGTGGAAGAGGCACCTGTTGAGAAGATCAGTGGCACTGGTAAGAAAAGGCACGGTTCCAAGGTACCCAAATCTCCCAAGTCAAAGAAGCCCAAAAGAGGACCTCGTACACCAAAGGATGAGAATACTCTTTCAGTTCAACGTGCAAGGTCTGCAAAGAAAACTACTGAAATTGTGATAAATGGGATTGACATGGATATCTCAAGTATTCCTATTCCAGTTTGTTCGTGCACTGGGACTCCTCAACAGTGTTACCGATGGGGTTCTGGTGGGTGGCAATCTGCATGTTGCACAACAAATATGTCAATGTATCCATTGCCTATGAGTACAAAGCGCCGTGGTGCTAGGATAGCTGGAAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAAAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATCGATTTGAAGACTTATTGGGCAAAACATGGCACTAACAAGTTTGTCACTATCAGGTAG 846 0.4385 MDGDNGLDIRNWGYYEPTTSFKNHLGLQLMSSMPEKPMLGGRNASVLSGNNVSFHHRTIGMPQATYPMDYMREAWISQREKLLNMIPSNPANYAIIPETSSAHHMQLVQPPDLVKEERPVEEAPVEKISGTGKKRHGSKVPKSPKSKKPKRGPRTPKDENTLSVQRARSAKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTNMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1923 281 MobiDBLite consensus disorder prediction 134 151 - -
Prci14g1923 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Prci14g1923 281 MobiDBLite consensus disorder prediction 111 168 - -
Prci14g1923 281 MobiDBLite consensus disorder prediction 111 133 - -
Prci14g1923 281 PANTHER - 1 281 IPR010409 -
Prci14g1923 281 SMART GAGA_bind_2 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1923 Prci-Chr14 26801714 26803274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1923 1 281 BBR or BPC Transcription factor family AT2G01930 52.027 1.11e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Prci14g1923 GAGA_bind 1.7e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1923 - - qsa:O6P43_008440 464.536