Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1917 ATGAGTGCTTCGGCGACGAGGAAGAAGGTTCAGCGCAAGTGTAAGATCAGAGGGTACACTCTCAAAGTAGATGCTCTTGATGAGATCCTTTCCTTTGTAAGTCGATTTGATGCTGCTGATGAAGATGAAGCTATCGATCTCCTTCTCGATCAGCTCGAACACGAATCTCTAAAATCCGCAATAATCGACAAAGAACCGGTGCATCGGGTGGTGAGCCTGCTGTTAGAAGCCGAAGCAGCAGCTGAGGAAAGCTCTGATGCTGTTGGGATTGGTTCAGTCTTTCGCGTCGTTGATGCATTCTTAGTCCCTAAATTTCGATACGATCCTATCAAAAAGCAATTCTACGAGCATACGAGCAGCTTACCTATTCATGGGGAAGCATCAGCGAAAGCTGCTCTATATAGGGACAGATTTCTGTCACTGTTCCAGAGGCTATCTCGTGATCAGCATTTTGCAAAGCCAGCTTTTGATTCTGAGTCTTCATATTTTGGAAGCTGTGAGATATCTCCCATCCAATCTCTGGTTGGGCAAACGGGTAGAAGATGGATCATGGGAGTGATATCACAGCTGGAAGATGGGCATTTTTATTTAGAAGACCTAACTGCTTCGGTTGAAATAAATTTATCTACTGCTAAGATAACTACAGGATTCTTTACAGAGAACACCATAATTGTGGCAGAAGGTGAGATGCTGGTGGGGGGTGTTTTTCAGGTTTTAACATGCGGATTCCCTCCATTGGAGGACAGAGACAAGTCACTAAAATTAATTGGGGGGCATGACTTTTTCGGAGGCGGCACTTTTACTAAAGAGGAAACCATCAGACTAGGAGAGATGGAAAAGAGGGCAGTGAATGACATGTTTGTTATACTGTCTGATATTTGGCTAGACAGTGAAGAGGCTATGGGAAAGCTGAAGACTGTACTGGATGGTTTTGAGAGTGTGGAAGTGGTCCCTTCCTTATTTGTTTTCATGGGCAACTTCTCTTCCCATCCATGTAACCTTTCCTTTCATTCTTACTCAAGCCTCCGGTTGCAGTTTGGTAAGCTAGGGCAAATGATTGCTGCCCATCCACGGCTAATAGAGAAAAGTCGATTTTTGTTCATTCCAGGTCCTGATGATCCAGGTCCTTCAACAGTTCTACCTAGATGTGCTCTGCCAAAATATTTAACCGAGGAGCTCCAGAAGCAAATTCCCAATGCCATATTTTCAAGCAATCCTTGCAGGATCAAATTTTACACTCAAGAAATTGTATTTTTCCGCCAGGATTTGCTGTATAGAATGCGCCGATCATGTTTAATGCCACCTTCTACGGAAGAAACTGATGATCTCTTTCAGCATCTGGTTGCTACCATAACCCACCAGAGTCATCTCTGTCCATTGCCTCTAACAGTTCAACCCATCATCTGGAACTATGATCACTGCCTATATCTTTATCCAACTCCACATACGCACCTTTGTGGCCTACAGGCCATGCTCTCAGGAAGTAGAATTGTCAGCCTTGTAAGCTTTGGAAAATTTTCCTTCGGTTCATCAGCCTATAATCTCGGCATCTCAGAGACAAGTGATTTATACATTCTTTAG 1581 0.4377 MSASATRKKVQRKCKIRGYTLKVDALDEILSFVSRFDAADEDEAIDLLLDQLEHESLKSAIIDKEPVHRVVSLLLEAEAAAEESSDAVGIGSVFRVVDAFLVPKFRYDPIKKQFYEHTSSLPIHGEASAKAALYRDRFLSLFQRLSRDQHFAKPAFDSESSYFGSCEISPIQSLVGQTGRRWIMGVISQLEDGHFYLEDLTASVEINLSTAKITTGFFTENTIIVAEGEMLVGGVFQVLTCGFPPLEDRDKSLKLIGGHDFFGGGTFTKEETIRLGEMEKRAVNDMFVILSDIWLDSEEAMGKLKTVLDGFESVEVVPSLFVFMGNFSSHPCNLSFHSYSSLRLQFGKLGQMIAAHPRLIEKSRFLFIPGPDDPGPSTVLPRCALPKYLTEELQKQIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSTEETDDLFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTHLCGLQAMLSGSRIVSLVSFGKFSFGSSAYNLGISETSDLYIL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1917 526 Pfam DNA polymerase alpha/epsilon subunit B 287 487 IPR007185 GO:0003677|GO:0006260
Prci14g1917 526 PIRSF DNA_pol_epsilon_2 1 491 IPR016266 GO:0003677|GO:0006261|GO:0008622
Prci14g1917 526 Gene3D - 1 72 - -
Prci14g1917 526 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 4 483 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1917 Prci-Chr14 26770264 26777042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1917 17 483 Core DNA Replication Machinery Family AT5G22110 73.233 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1917 K02325 - qsa:O6P43_008430 845.114