LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci14g1915	ATGGAGATGCAGGACCAAAATGAAGGAACAAAGTTGAATAGTGCTGGCAATGCTAGTAATAACCATCCCAACAACGGCACAAAATCAGAAAATGTTGCCCTGTTGAAGGATCACACTCCTAACGAAAACAACCATACTCCTAAGGTGAGGAAACCCTATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTAGAAGCTTTGAAATTGTATGGTCGTGGTTGGCGGCAAATTGAAGAACACGTAGGTACAAAGACTGCCGTTCAGATTCGAAGCCATGCCCAGAAATTCTTCTCTAAGGTTACCCGGGAATCTGATGGTACTGCTGAAAGTTCTATAAAACCAAGTGATATACCGCCTCCTCGGCCAAAGAGGAAGCCCCTGCATCCATATCCCCGGAAATCAGTTGATTCTAGTAAAAGCCTATCTATAGCAAATGAAGCGGAAAGATCTTCATCCCCAAACCTGGCAGTTGCAGAGAAAGACACCCAATCTCCGACCTCTGTGTTCTCTGCATTTAATTCAGAAGTATTTGGGTCAGCATCTTCAGAGCAGCCTAACAGATGTCAATCACCTAATTCTTGTGCCACTGAGGTTCGCTCATCCAACTCATCACTGTCACCTGTTGAAAACTCTTTATCTGCTGGTTTGAACATACATGTATTGCCGACGAAGTCTGAGTTGAGTTCCAAGGATACTGAATCTTCTATTGAAAATGCTACCAACGTGGCCCATGTTACAAGTATTAAGCTGTTTGGAAGAACTGTTCAGATGGTAGATAATCCGAAGTCACTTGATGTAGTTGGGGAGAATATCAAGGTAGCTGCAAGCAAGTCTGATCAAGTAGATGATGTTGAGAACGAAAAGCTTGGCCAAACATGGCCATCCAGTCAACTCGATTCACAATTATCACTGGGCATGTATGATAGTGCTGCAACCCTTGAAGGAGCTGAAGCAAATTGCTCAGAATACCGGAAAGAGAACCCATGCTTTGTGGAACCTGCACCTGATGAAACTTTGTCATGGTGGAATATGTGCCAACACCTTCCACTCGTTTACATTCGTCCATGTAACCAAATTCTAAATCCTAAACCTATCCGTCCCTCTTTGAAAGACAGGGTGATAGAGAAGGAAACTTCCTGTACTGGTTCAAATGCTGAAACTGTTTGTGAAATGGAAAATGGGGACAGGAACTCAGAATCTGATGATTCTCAAAGCCAATTGTCTCATCACGAGGGAGAGAATGTACCCTGCAGAGTGTCTTCAAGAGGGTTTGTACCATATAAAAGATGTTTAGCCGAGAGAGATCCAAGTTCAGCTTTTGTTGCATTGGAAGGGAGGAAGGGGCAACGGGCTAGGGTATGCCTGTAG	1389	0.4384	MEMQDQNEGTKLNSAGNASNNHPNNGTKSENVALLKDHTPNENNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVTRESDGTAESSIKPSDIPPPRPKRKPLHPYPRKSVDSSKSLSIANEAERSSSPNLAVAEKDTQSPTSVFSAFNSEVFGSASSEQPNRCQSPNSCATEVRSSNSSLSPVENSLSAGLNIHVLPTKSELSSKDTESSIENATNVAHVTSIKLFGRTVQMVDNPKSLDVVGENIKVAASKSDQVDDVENEKLGQTWPSSQLDSQLSLGMYDSAATLEGAEANCSEYRKENPCFVEPAPDETLSWWNMCQHLPLVYIRPCNQILNPKPIRPSLKDRVIEKETSCTGSNAETVCEMENGDRNSESDDSQSQLSHHEGENVPCRVSSRGFVPYKRCLAERDPSSAFVALEGRKGQRARVCL	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci14g1915	462	CDD	SANT	61	104	IPR001005	-
	Prci14g1915	462	Gene3D	-	61	108	-	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	392	421	-	-
	Prci14g1915	462	SMART	sant	58	106	IPR001005	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	399	415	-	-
	Prci14g1915	462	Pfam	Myb-like DNA-binding domain	59	102	IPR001005	-
	Prci14g1915	462	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	54	108	IPR017930	-
	Prci14g1915	462	FunFam	protein REVEILLE 6 isoform X1	61	109	-	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	142	169	-	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	1	51	-	-
	Prci14g1915	462	SUPERFAMILY	Homeodomain-like	53	108	IPR009057	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	105	169	-	-
	Prci14g1915	462	ProSiteProfiles	SANT domain profile.	57	108	IPR017884	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	186	216	-	-
	Prci14g1915	462	MobiDBLite	consensus disorder prediction	1	65	-	-
	Prci14g1915	462	PANTHER	SWI/SNF COMPLEX-RELATED	20	301	-	-
	Prci14g1915	462	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	57	106	IPR006447	GO:0003677
	Prci14g1915	462	ProSiteProfiles	Myb-like domain profile.	54	104	IPR001005	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci14g1915	Prci-Chr14	26743590	26747207	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Prci14g1915		Myb_DNA-binding	8.4e-14	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci14g1915	-		-	gmx:778089	484.567