Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1914 ATGGAGATGCAGGACCAAAATGAAGGAACAAAGTTGAATAGTGCTGGCAATGCTAGTAATAACCATCCCAACAACGGCACAAAATCAGAAAATGTTGCCCTGTTGAAGGATCACACTCCTAACGAAAACAACCATACTCCTAAGGTGAGGAAACCCTATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTAGAAGCTTTGAAATTGTATGGTCGTGGTTGGCGGCAAATTGAAGAACACGTAGGTACAAAGACTGCCGTTCAGATTCGAAGCCATGCCCAGAAATTCTTCTCTAAGGTTACCCGGGAATCTGATGGTACTGCTGAAAGTTCTATAAAACCAAGTGATATACCGCCTCCTCGGCCAAAGAGGAAGCCCCTGCATCCATATCCCCGGAAATCAGTTGATTCTAGTAAAAGCCTATCTATAGCAAATGAAGCGGAAAGATCTTCATCCCCAAACCTGGCAGTTGCAGAGAAAGACACCCAATCTCCGACCTCTGTGTTCTCTGCATTTAATTCAGAAGTATTTGGGTCAGCATCTTCAGAGCAGCCTAACAGATGTCAATCACCTAATTCTTGTGCCACTGAGAAGTCTGAGTTGAGTTCCAAGGATACTGAATCTTCTATTGAAAATGCTACCAACGTGGCCCATGTTACAAGTATTAAGCTGTTTGGAAGAACTGTTCAGATGGTAGATAATCCGAAGTCACTTGATGTAGTTGGGGAGAATATCAAGGTAGCTGCAAGCAAGTCTGATCAAGTAGATGATGTTGAGAACGAAAAGCTTGGCCAAACATGGCCATCCAGTCAACTCGATTCACAATTATCACTGGGCATGTATGATAGTGCTGCAACCCTTGAAGGAGCTGAAGCAAATTGCTCAGAATACCGGAAAGAGAACCCATGCTTTGTGGAACCTGCACCTGATGAAACTTTGTCATGGTGGAATATGTGCCAACACCTTCCACTCGTTTACATTCGTCCATGTAACCAAATTCTAAATCCTAAACCTATCCGTCCCTCTTTGAAAGACAGGGTGATAGAGAAGGAAACTTCCTGTACTGGTTCAAATGCTGAAACTGTTTGTGAAATGGAAAATGGGGACAGGAACTCAGAATCTGATGATTCTCAAAGCCAATTGTCTCATCACGAGGGAGAGAATGTACCCTGCAGAGTGTCTTCAAGAGGGTTTGTACCATATAAAAGATGTTTAGCCGAGAGAGATCCAAGTTCAGCTTTTGTTGCATTGGAAGGGAGGAAGGGGCAACGGGCTAGGGTATGCCTGTAG 1311 0.4386 MEMQDQNEGTKLNSAGNASNNHPNNGTKSENVALLKDHTPNENNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVTRESDGTAESSIKPSDIPPPRPKRKPLHPYPRKSVDSSKSLSIANEAERSSSPNLAVAEKDTQSPTSVFSAFNSEVFGSASSEQPNRCQSPNSCATEKSELSSKDTESSIENATNVAHVTSIKLFGRTVQMVDNPKSLDVVGENIKVAASKSDQVDDVENEKLGQTWPSSQLDSQLSLGMYDSAATLEGAEANCSEYRKENPCFVEPAPDETLSWWNMCQHLPLVYIRPCNQILNPKPIRPSLKDRVIEKETSCTGSNAETVCEMENGDRNSESDDSQSQLSHHEGENVPCRVSSRGFVPYKRCLAERDPSSAFVALEGRKGQRARVCL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1914 436 CDD SANT 61 104 IPR001005 -
Prci14g1914 436 SMART sant 58 106 IPR001005 -
Prci14g1914 436 SUPERFAMILY Homeodomain-like 53 108 IPR009057 -
Prci14g1914 436 MobiDBLite consensus disorder prediction 186 217 - -
Prci14g1914 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Prci14g1914 436 MobiDBLite consensus disorder prediction 142 169 - -
Prci14g1914 436 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Prci14g1914 436 MobiDBLite consensus disorder prediction 1 51 - -
Prci14g1914 436 MobiDBLite consensus disorder prediction 105 169 - -
Prci14g1914 436 MobiDBLite consensus disorder prediction 186 206 - -
Prci14g1914 436 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Prci14g1914 436 PANTHER SWI/SNF COMPLEX-RELATED 20 277 - -
Prci14g1914 436 MobiDBLite consensus disorder prediction 373 389 - -
Prci14g1914 436 MobiDBLite consensus disorder prediction 1 65 - -
Prci14g1914 436 MobiDBLite consensus disorder prediction 366 395 - -
Prci14g1914 436 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Prci14g1914 436 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Prci14g1914 436 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Prci14g1914 436 Gene3D - 61 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1914 Prci-Chr14 26743590 26747208 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g1914 Myb_DNA-binding 7.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1914 - - gmx:778089 472.626