Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1912 ATGATGAGGGGCAGTAGTCGAGGACATCAACACCATGTTGAAAGAAGTGCTGCCCCCACACAGCATGCAACAGGAGGGAGAGGATCCCAAGGAGGTAGAGCTTGGGGTCCTCAAGGAGGACGGGGAGGTTCTGGCGAGGGGCGGGGTCGATGGATGCCCAAACAGCAGTATGGTGCTACTCCTGAATATCAAGGAAGGGGGAGGGGAGAGTCTCCTCAGCATTTAGGTCGTGGACGTGGTGGTGGGGGCATTGGTGGTGGCTGTTGTGGTGGATCTTACGGGGGCCCATCTGAACCTCAAGCACCCGAGCTGCACCAAGCTGCCCCTTTTCCGCATCATGCTGGGGTGAGCCCTCAATTTGCAACATCTGAGGCCAGTTCTTCCCAACAGCCTGATACCTCACAAGTAGAACAACAAATGGGGGAGATGACAATTCATTCAGAAACTATTTCTCCTGCCCCTTCCTCAAGCAAATCAGTGAGGTTCCCCCTTAGGCCTGGAAAGGGTAGCTGTGGCCGCAAGTGTATGGTTAAGGTTAACCACTTCCTTGCAGAGTTACCTACTAAAGATTTTCACCATTATGATGTCACTATCACTCCAGAAGTGACATCAAGGGGTGTCAATCGTGCTGTTGTGGAGCAGCTGGTGAGGCTGTATCGAGAGTCTCATCTGGGTAAGAGACTTCCTGTGTATGATGGGCGCAAGAGCCTTTACACTGCTGGTCCACTTCCTTTCATTTCAAAGGAGTTCAGAATCCCGCTCCTTGATGAAAATGATGGATCAGGAGGGCCAAGAAGAGAGAGGGAGTTCAAAGTTGTGATGAAATTTGCTGCCCGGGTAGATCTACATCATCTAGAGCTCTTCCTGCGCGGAAGGCAAACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGACATCGTGCTGCGTGAGCTACCTTCCACTAGGTATTGTCCTGTGGGAAGATCATTTTATTCACCAGATCTAGGTAGAAGGCAACCGTTAGGTGATGCATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCCACTCAGATAGGATTGTCTCTTATCATTGATATGTCCTCAACTGCATTCATTGAACCATTGCCGGTAATTGATTTTGTCACTCAGTTGCTCCGTCGTGATGCCTCCTCCCGCCCATTGTCTGATGCAGATCGTGTAAAGATAAAGAAAGCACTTCGGGGGGTCAAAGTTGAAGTGACACACCGTGGAAATATGAGAAGAAAATATCGTATCTCTGGACTGACTTCACAAGCAACCCGAGAGCTTATGTTCCCTGTTGATGAAAGTGGAACAATGAAGTCTGTTGTTGAGTATTTTTCAGAATCATATGGATTTGTCATTCAACATACCCAATGGCCTTGCTTGCAAGCGGGGAATGAGCAGAGACCAATCTATTTACCGATGGAGGTTTGCAAGATAGTAGAAGGTCAAAGGTACCGGAAGAGGTTGAATGAAAAGCAGATTACTGCTATGCTCAAAGGCATATGCCAGCGTCCTGTTGACAGGGAGCGTGATATTATGCAGACAGTTCATCATAATGCTTACCGTGATGATCCTTATGCTAGAGAGTTTGGAATCAAAATTAGTGAAAAGCCAGCTCAAGTTGAAGCTCGCATCCTTTCTCCACCCAGGCTTAAATACCATGATACAGGTAGAGAAAAGGACTGTCTGCCTCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGCGGGACAGTAAACCACTGGATCTGCATCAATTTTTCTGGAAATGTTCAAGATAGTGTTGCAAGTGGGTTTTGTTATGAACTTGCTCAAATGTGTTGTATATCTGGCATGGCATTCAACTCACAGCCGGTACTTCCCCCATATAGTGCCCGTCCTGACTTGGTGGATAAGGTTCTCAAAACTCGGTATCATGATGCAAAAACCAAACTGAGGGGGAAGGAGCTTGATCTTCTTATTGTTATTTTGCCTGATAATAATGGGTCGCTTTATGGTGACCTGAAACGAATGTGTGAGACAGATCTTGGGGTTGTTTCTCAGTGCTGTTTGACTAAGCATGTCTATAAAATGAGCAAGCAGTACCTTGCTAATGTTGCCTTGAAAATCAATGTAAAAGTAGGCGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGTATACCTCTAGTCAGTGATCGACCCACAATTATTTTTGGTGCCGATGTTACTCATCCACATGCTGGAGAGGATTCAAGTCCATCCATTGCTGCTGTTGTGGCGTCTCAAGATTGGCCTGAAATCACAAAGTATGCTGGTTTGGTGCGTGCTCAAGCTCATCGTCAGGAGCTCATTCAAGACCTTTTCCAACAATGGCAGGATCCAGTGAGGGGAACAGTAACTGGTGGAATCGTCAAGGAGCATCTCATATCTTTCCGGAGGGCCACGGGGCACAAGCCACAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCTATCAGGTTTTGCGGTCTGAGCTTGATGCTATCCGAAAGGCATGTGCATCTCTGGAACCTAATTATCAACCACCTGTGACATTTGTGGTGGTTCAGAAGCGTCATCATACTAGGCTATTTGCCAGCAACCATCATGACAAGGGATCTGTTGACCGGAGTGGGAACATATTGCCAGGCACTGTTGTAGACTCAGATATCTGTCATCCTATTGAGTTTGACTTTTATCTTTGTAGCCATGCTGGGATCCAGGGAACAAGCCGTCCAGCTCATTACCATGTGTTATGGGATGAAAATAATTTCACAGCTGATGCACTGCAAACTCTGACGAACAACCTTTGTTATACTTATGCTAGATGCACTCGTTCAGTTTCAATTGCACCACCTGTATATTATGCTCATTTGGCAGCCTTCCGAGCTCGGTTTTATATGGAACGGGAGACATCGGAGAGTGGATCCATGACAAGTGGTGCTGCTGCAGCTCGTGGAGTTGGTGGGGCTGTGCGGAGCACTCGAGCACCAGATGGCGGTGCTACTGTTAGGCCTCTTCCAGATCTTAAGGAGAATGTGAAGAGGGTTATGTTCTATGTTTAA 3096 0.4693 MMRGSSRGHQHHVERSAAPTQHATGGRGSQGGRAWGPQGGRGGSGEGRGRWMPKQQYGATPEYQGRGRGESPQHLGRGRGGGGIGGGCCGGSYGGPSEPQAPELHQAAPFPHHAGVSPQFATSEASSSQQPDTSQVEQQMGEMTIHSETISPAPSSSKSVRFPLRPGKGSCGRKCMVKVNHFLAELPTKDFHHYDVTITPEVTSRGVNRAVVEQLVRLYRESHLGKRLPVYDGRKSLYTAGPLPFISKEFRIPLLDENDGSGGPRREREFKVVMKFAARVDLHHLELFLRGRQTDAPQEALQVLDIVLRELPSTRYCPVGRSFYSPDLGRRQPLGDALESWRGFYQSIRPTQIGLSLIIDMSSTAFIEPLPVIDFVTQLLRRDASSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELMFPVDESGTMKSVVEYFSESYGFVIQHTQWPCLQAGNEQRPIYLPMEVCKIVEGQRYRKRLNEKQITAMLKGICQRPVDRERDIMQTVHHNAYRDDPYAREFGIKISEKPAQVEARILSPPRLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSGNVQDSVASGFCYELAQMCCISGMAFNSQPVLPPYSARPDLVDKVLKTRYHDAKTKLRGKELDLLIVILPDNNGSLYGDLKRMCETDLGVVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHAGEDSSPSIAAVVASQDWPEITKYAGLVRAQAHRQELIQDLFQQWQDPVRGTVTGGIVKEHLISFRRATGHKPQRIIFYRDGVSEGQFYQVLRSELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKGSVDRSGNILPGTVVDSDICHPIEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIAPPVYYAHLAAFRARFYMERETSESGSMTSGAAAARGVGGAVRSTRAPDGGATVRPLPDLKENVKRVMFYV 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1912 1031 Pfam Argonaute linker 2 domain 510 556 IPR032472 -
Prci14g1912 1031 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 147 980 - -
Prci14g1912 1031 ProSiteProfiles PAZ domain profile. 370 484 IPR003100 GO:0005515
Prci14g1912 1031 FunFam Protein argonaute-2 363 489 - -
Prci14g1912 1031 SMART Piwi_a_2 658 979 IPR003165 GO:0003676
Prci14g1912 1031 FunFam Argonaute 10 548 721 - -
Prci14g1912 1031 Pfam Glycine-rich region of argonaut 58 149 IPR024357 -
Prci14g1912 1031 ProSiteProfiles Piwi domain profile. 658 979 IPR003165 GO:0003676
Prci14g1912 1031 SMART PAZ_2_a_3 374 507 IPR003100 GO:0005515
Prci14g1912 1031 Pfam PAZ domain 376 501 IPR003100 GO:0005515
Prci14g1912 1031 Gene3D - 727 1031 IPR036397 GO:0003676
Prci14g1912 1031 CDD PAZ_argonaute_like 369 483 - -
Prci14g1912 1031 MobiDBLite consensus disorder prediction 119 140 - -
Prci14g1912 1031 Pfam Mid domain of argonaute 567 642 IPR032473 -
Prci14g1912 1031 SMART DUF1785_2 317 369 IPR014811 -
Prci14g1912 1031 MobiDBLite consensus disorder prediction 1 140 - -
Prci14g1912 1031 Pfam Piwi domain 659 978 IPR003165 GO:0003676
Prci14g1912 1031 SUPERFAMILY PAZ domain 364 524 IPR036085 GO:0005515
Prci14g1912 1031 FunFam protein argonaute 10-like 727 1031 - -
Prci14g1912 1031 SUPERFAMILY Ribonuclease H-like 644 979 IPR012337 -
Prci14g1912 1031 Gene3D paz domain 363 488 - -
Prci14g1912 1031 Pfam N-terminal domain of argonaute 173 308 IPR032474 -
Prci14g1912 1031 Gene3D - 548 721 - -
Prci14g1912 1031 Pfam Argonaute linker 1 domain 318 368 IPR014811 -
Prci14g1912 1031 CDD Piwi_ago-like 528 978 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1912 Prci-Chr14 26698653 26706801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1912 62 1030 Eukaryotic Initiation Factors Gene Family AT1G48410 77.561 0.0 1518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1912 K11593 - gmx:100778754 1660.2