Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1910 ATGGTAAGGAAAAGGAGAACTGAAGCACCCAGTGGAGGTGAAAGCTCCGAGACTTGGGAGAGTGGGGGCAATAGTCGAGGACCTCCACACCATGTTGAAAGTGCTGCACCCCCACAGCAAGCAGCAGGAGGGGGAGGATCCCAAGGAGGTAGAGGTTGGGGTCCTCAAGGAGGAAGGGGAGGTTCTGGTGGGGGGCGGGGTCGATGGATGCCCCAACAGCAGTATGGTGCCGCTCCTGAATATCAAGGAAGGGGGAGGGGAGAGTCTCCGCAGCATTTAGGTCGTGGACGTGGTGGGGGGGGCATTGGTGGTGGCCGAGGTGGTGGACCTTATGGGGGCCCATCTGGACCTCAAGCACCCGAGCTGCACCAAGCTACCCCTTTTCCGCATCATGCTGGGGTGACCCCTCAATTTGCAACATCTGAGGCCAGTTCTTCCCAACAGGCTGATACCTCACAAGTAGAACAACAAATGGGGGAGATGACAATTCATTCAGAATCTGTTTCTCCTGCCCCATCCTCAAGCAAATCAGTGAGGTTCCCCCTTAGGCCTGGAAAGGGTAGCTATGGCACCAAGCGTTTGGTTAAGGCAAACCACTTCTTTGCAGAGTTACCTACGAAAGATTTTCACCACTATGATGTCACTATCACTCCAGAAGTGACATCAAGGGGTGTCAATCGTGCTGTTATGGAGCAGCTGGTGAGGCTGTATCGAGAGTCTCATCTGGGTAAGAGACTTCCTGCATATGATGGGCGCAAGAGCCTTTACACTGCTGGTCCGCTTCCTTTCATTTCAAAGGAGTTCAAAATCACTCTCCTTGATGAAGATGATGGATCAGGAGGGCCAAGAAGAGAGAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCCCGGGTAGATCTACATCATCTAGAACTCTTCCTGCGCGGAAGGCAAACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGACATCGTGCTGCGTGAAATACCTACAGCTAGGTATTGTCCTGTGGGGAGATCATTTTATTCACCAGATCTAGGTAGAAGGCAACCATTAGGTGATGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCTACTCAGATGGGATTGTCTCTCAACATTGATATGTCCTCAACTGCATTCATTGAACCATTGCCGGTAATTGATTTTGTTACTCAGTTGCTCAGTCGTGATGTCTCCTCCCGCCCATTGTCTGATGCAGATCGTGTAAAGATAAAGAAAGCACTTCGGGGGATCAAAGTTGAAGTGACACACCGTGGAAACATGAGAAGAAAATATCGTATCTCTGGTCTGACTTCACAAGCAACCCGAGAGCTTATGTTCCCTGTTGATGCAAGTGGAACAATGAAGTCTGTTGTTCAGTATTTTTTGGAAACATATGGATTTGTCATTCAACATACCCAATGGCCTTGCTTGCAAGTGGGCAATGCACAGAGACCAAACTATTTACCAATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCGAAGAGGTTGAATGAAAAGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCCTGTTGAAAGGGAGCGTGATATTATGCAGACAGTTCATCATAATGCTTACCGTGACGATCCTTACGCTAAAGAGTTTGGAATCAAAATCAGTGAAAAGCTAGCTCAAGTTGAAGCTCGCATCCTTCCTGCACCCTGGCTTAAATACCATGATACAGGTAGAGAAAAGAATTGTTTACCTCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGTGGGACGGTCAACCACTGGATCTGCATCAATTTTTCCAGAAATGTTCAAGATAGTGTTGCAAGTGGGTTTTGTTATGAACTTGCTCAGATGTGTTATATATCTGGCATGGCATTCAACACAGAGCCCGTACTTCCCCCATATAGTGCCCGTCCTGACTTGGTGGATAAGGTTCTCAAAACTCGGTATCATGATGCAAAAACCAGACTGAGGGGGAAGGAGCTTGATCTTCTTATCGTTATTTTGCCTGATAATAATGGCTCGCTTTATGGTGACCTGAAACGAATATGTGAGACAGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACTAAGCATGTCTATAAAATGAGCAAGCAGTACCTTGCTAATGTTGCCTTGAAAATAAATGTAAAAGTAGGCGGAAGGAACACTGTGCTTGTTGATGCACTTTCAAGACGCATACCCCTAGTCAGCGACCGACCCACAATTATTTTTGGTGCCGATGTTACTCACCCACATCCTGGAGAGGATTCAAGTCCATCCATTGCCGCTGTTGTGGCGTCTCAAGATTGGCCTGAAATCACAAAGTATGCTGGTTTGGTGCGTGCTCAAGCTCATCGTCAGGAGCTCATTCAGGACCTTTTCAAACAATGGCAAGATCCAGTGAGGGGAACAGTGACTGGTGGAATGATCAAGGAGCTTCTGATATCTTTCCGGAGGGCCACAGGACAGAAGCCACAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCTATCAGGTTTTACTGTTTGAGCTTGATGCTATCCGAAAGGCATGTGCATCTCTGGAACCTAATTATCAGCCACCTGTGACATTTGTGGTGGTTCAGAAGCGTCATCATACTAGGCTATTTGCCAGCAACCATCATGACAAGAGTTTTGTTGACCGGAGTGGGAACATATTGCCAGGCACTGTTGTAGACTCAGAGATCTGTCATCCTACTGAGTTTGACTTTTATCTTTGTAGCCATGCTGGGATCCAGGGAACAAGCCGTCCAGCTCATTACCATGTGTTATGGGATGAAAATAATTTCACAGCTGATGCACTGCAAACTCTGACGAACAACCTTTGTTATACTTATGCTAGATGCACTCGTTCAGTTTCAATTGTACCCCCTGCATATTATGCTCATTTGGCAGCCTTCCGAGCTCGGTTTTATATGGAACCGGAGACGTCGGAGAGTGGGTCCATGACAAGTGGTCATGCTGCAGCACGTGTCGTTGGTGGGCCCGTGCGGAGCACTCGAGCACCAGGTGGTGGTGTTACTGTTAGGCCTCTTCCAGATCTTAAGGAGAATGTGAAGAGGGTTATGTTCTATTGTTAA 3150 0.4717 MVRKRRTEAPSGGESSETWESGGNSRGPPHHVESAAPPQQAAGGGGSQGGRGWGPQGGRGGSGGGRGRWMPQQQYGAAPEYQGRGRGESPQHLGRGRGGGGIGGGRGGGPYGGPSGPQAPELHQATPFPHHAGVTPQFATSEASSSQQADTSQVEQQMGEMTIHSESVSPAPSSSKSVRFPLRPGKGSYGTKRLVKANHFFAELPTKDFHHYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEFKITLLDEDDGSGGPRREREFKVVIKLAARVDLHHLELFLRGRQTDAPQEALQVLDIVLREIPTARYCPVGRSFYSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLSRDVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELMFPVDASGTMKSVVQYFLETYGFVIQHTQWPCLQVGNAQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPVERERDIMQTVHHNAYRDDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKNCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQDSVASGFCYELAQMCYISGMAFNTEPVLPPYSARPDLVDKVLKTRYHDAKTRLRGKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVRAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSFVDRSGNILPGTVVDSEICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMTSGHAAARVVGGPVRSTRAPGGGVTVRPLPDLKENVKRVMFYC 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1910 1049 Pfam Mid domain of argonaute 585 660 IPR032473 -
Prci14g1910 1049 SMART Piwi_a_2 676 997 IPR003165 GO:0003676
Prci14g1910 1049 CDD PAZ_argonaute_like 387 501 - -
Prci14g1910 1049 Gene3D - 745 1049 IPR036397 GO:0003676
Prci14g1910 1049 SUPERFAMILY Ribonuclease H-like 663 997 IPR012337 -
Prci14g1910 1049 ProSiteProfiles PAZ domain profile. 388 502 IPR003100 GO:0005515
Prci14g1910 1049 FunFam protein argonaute 10-like 745 1049 - -
Prci14g1910 1049 Gene3D paz domain 381 506 - -
Prci14g1910 1049 Pfam Argonaute linker 2 domain 528 574 IPR032472 -
Prci14g1910 1049 FunFam Protein argonaute-2 381 507 - -
Prci14g1910 1049 Gene3D - 566 739 - -
Prci14g1910 1049 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 168 998 - -
Prci14g1910 1049 SMART PAZ_2_a_3 392 524 IPR003100 GO:0005515
Prci14g1910 1049 Pfam Piwi domain 677 996 IPR003165 GO:0003676
Prci14g1910 1049 Pfam Argonaute linker 1 domain 336 386 IPR014811 -
Prci14g1910 1049 Pfam Glycine-rich region of argonaut 76 169 IPR024357 -
Prci14g1910 1049 CDD Piwi_ago-like 546 996 IPR045246 -
Prci14g1910 1049 MobiDBLite consensus disorder prediction 137 176 - -
Prci14g1910 1049 Pfam N-terminal domain of argonaute 194 326 IPR032474 -
Prci14g1910 1049 SUPERFAMILY PAZ domain 382 542 IPR036085 GO:0005515
Prci14g1910 1049 MobiDBLite consensus disorder prediction 1 188 - -
Prci14g1910 1049 FunFam Argonaute 10 566 739 - -
Prci14g1910 1049 Pfam PAZ domain 393 518 IPR003100 GO:0005515
Prci14g1910 1049 ProSiteProfiles Piwi domain profile. 676 997 IPR003165 GO:0003676
Prci14g1910 1049 SMART DUF1785_2 335 387 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1910 Prci-Chr14 26663470 26670963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1910 80 1049 Eukaryotic Initiation Factors Gene Family AT1G48410 79.529 0.0 1570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1910 K11593 - gmx:100778754 1740.32