Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1909 ATGGTAAGGAAAAGGAGAACTGAAGCACCCAGTGGAGGTGAAAGCTCCGAGACTTGGGAGAGTGGGGGCAATAGTCGAGGACCTCCACACCATGTTGAAAGTGCTGCACCCCCACAGCAAGCAGCAGGAGGGGGAGGATCCCAAGGAGGTAGAGGTTGGGGTCCTCAAGGAGGAAGGGGAGGTTCTGGTGGGGGGCGGGGTCGATGGATGCCCCAACAGCAGTATGGTGCCGCTCCTGAATATCAAGGAAGGGGGAGGGGAGAGTCTCCGCAGCATTTAGGTCGTGGACGTGGTGGGGGGGGCATTGGTGGTGGCCGAGGTGGTGGACCTTATGGGGGCCCATCTGGACCTCAAGCACCCGAGCTGCACCAAGCTACCCCTTTTCCGCATCATGCTGGGGTGACCCCTCAATTTGCAACATCTGAGGCCAGTTCTTCCCAACAGGCTGATACCTCACAAGTAGAACAACAAATGGGGGAGATGACAATTCATTCAGAATCTGTTTCTCCTGCCCCATCCTCAAGCAAATCAGTGAGGTTCCCCCTTAGGCCTGGAAAGGGTAGCTATGGCACCAAGCGTTTGGTTAAGGCAAACCACTTCTTTGCAGAGTTACCTACGAAAGATTTTCACCACTATGATGTCACTATCACTCCAGAAGTGACATCAAGGGGTGTCAATCGTGCTGTTATGGAGCAGCTGGTGAGGCTGTATCGAGAGTCTCATCTGGGTAAGAGACTTCCTGCATATGATGGGCGCAAGAGCCTTTACACTGCTGGTCCGCTTCCTTTCATTTCAAAGGAGTTCAAAATCACTCTCCTTGATGAAGATGATGGATCAGGAGGGCCAAGAGAGAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCCCGGGTAGATCTACATCATCTAGAACTCTTCCTGCGCGGAAGGCAAACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGACATCGTGCTGCGTGAAATACCTACAGCTAGGTATTGTCCTGTGGGGAGATCATTTTATTCACCAGATCTAGGTAGAAGGCAACCATTAGGTGATGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCTACTCAGATGGGATTGTCTCTCAACATTGATATGTCCTCAACTGCATTCATTGAACCATTGCCGGTAATTGATTTTGTTACTCAGTTGCTCAGTCGTGATGTCTCCTCCCGCCCATTGTCTGATGCAGATCGTGTAAAGATAAAGAAAGCACTTCGGGGGATCAAAGTTGAAGTGACACACCGTGGAAACATGAGAAGAAAATATCGTATCTCTGGTCTGACTTCACAAGCAACCCGAGAGCTTATGTTCCCTGTTGATGCAAGTGGAACAATGAAGTCTGTTGTTCAGTATTTTTTGGAAACATATGGATTTGTCATTCAACATACCCAATGGCCTTGCTTGCAAGTGGGCAATGCACAGAGACCAAACTATTTACCAATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCGAAGAGGTTGAATGAAAAGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCCTGTTGAAAGGGAGCGTGATATTATGCAGACAGTTCATCATAATGCTTACCGTGACGATCCTTACGCTAAAGAGTTTGGAATCAAAATCAGTGAAAAGCTAGCTCAAGTTGAAGCTCGCATCCTTCCTGCACCCTGGCTTAAATACCATGATACAGGTAGAGAAAAGAATTGTTTACCTCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGTGGGACGGTCAACCACTGGATCTGCATCAATTTTTCCAGAAATGTTCAAGATAGTGTTGCAAGTGGGTTTTGTTATGAACTTGCTCAGATGTGTTATATATCTGGCATGGCATTCAACACAGAGCCCGTACTTCCCCCATATAGTGCCCGTCCTGACTTGGTGGATAAGGTTCTCAAAACTCGGTATCATGATGCAAAAACCAGACTGAGGGGGAAGGAGCTTGATCTTCTTATCGTTATTTTGCCTGATAATAATGGCTCGCTTTATGGTGACCTGAAACGAATATGTGAGACAGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACTAAGCATGTCTATAAAATGAGCAAGCAGTACCTTGCTAATGTTGCCTTGAAAATAAATGTAAAAGTAGGCGGAAGGAACACTGTGCTTGTTGATGCACTTTCAAGACGCATACCCCTAGTCAGCGACCGACCCACAATTATTTTTGGTGCCGATGTTACTCACCCACATCCTGGAGAGGATTCAAGTCCATCCATTGCCGCTGTTGTGGCGTCTCAAGATTGGCCTGAAATCACAAAGTATGCTGGTTTGGTGCGTGCTCAAGCTCATCGTCAGGAGCTCATTCAGGACCTTTTCAAACAATGGCAAGATCCAGTGAGGGGAACAGTGACTGGTGGAATGATCAAGGAGCTTCTGATATCTTTCCGGAGGGCCACAGGACAGAAGCCACAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCTATCAGGTTTTACTGTTTGAGCTTGATGCTATCCGAAAGGCATGTGCATCTCTGGAACCTAATTATCAGCCACCTGTGACATTTGTGGTGGTTCAGAAGCGTCATCATACTAGGCTATTTGCCAGCAACCATCATGACAAGAGTTTTGTTGACCGGAGTGGGAACATATTGCCAGGCACTGTTGTAGACTCAGAGATCTGTCATCCTACTGAGTTTGACTTTTATCTTTGTAGCCATGCTGGGATCCAGGGAACAAGCCGTCCAGCTCATTACCATGTGTTATGGGATGAAAATAATTTCACAGCTGATGCACTGCAAACTCTGACGAACAACCTTTGTTATACTTATGCTAGATGCACTCGTTCAGTTTCAATTGTACCCCCTGCATATTATGCTCATTTGGCAGCCTTCCGAGCTCGGTTTTATATGGAACCGGAGACGTCGGAGAGTGGGTCCATGACAAGTGGTCATGCTGCAGCACGTGTCGTTGGTGGGCCCGTGCGGAGCACTCGAGCACCAGGTGGTGGTGTTACTGTTAGGCCTCTTCCAGATCTTAAGGAGAATGTGAAGAGGGTTATGTTCTATTGTTAA 3147 0.4719 MVRKRRTEAPSGGESSETWESGGNSRGPPHHVESAAPPQQAAGGGGSQGGRGWGPQGGRGGSGGGRGRWMPQQQYGAAPEYQGRGRGESPQHLGRGRGGGGIGGGRGGGPYGGPSGPQAPELHQATPFPHHAGVTPQFATSEASSSQQADTSQVEQQMGEMTIHSESVSPAPSSSKSVRFPLRPGKGSYGTKRLVKANHFFAELPTKDFHHYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEFKITLLDEDDGSGGPREREFKVVIKLAARVDLHHLELFLRGRQTDAPQEALQVLDIVLREIPTARYCPVGRSFYSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLSRDVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELMFPVDASGTMKSVVQYFLETYGFVIQHTQWPCLQVGNAQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPVERERDIMQTVHHNAYRDDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKNCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQDSVASGFCYELAQMCYISGMAFNTEPVLPPYSARPDLVDKVLKTRYHDAKTRLRGKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVRAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSFVDRSGNILPGTVVDSEICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMTSGHAAARVVGGPVRSTRAPGGGVTVRPLPDLKENVKRVMFYC 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1909 1048 SUPERFAMILY Ribonuclease H-like 662 996 IPR012337 -
Prci14g1909 1048 FunFam Argonaute 10 565 738 - -
Prci14g1909 1048 SMART PAZ_2_a_3 391 523 IPR003100 GO:0005515
Prci14g1909 1048 FunFam Protein argonaute-2 380 506 - -
Prci14g1909 1048 Gene3D - 744 1048 IPR036397 GO:0003676
Prci14g1909 1048 Pfam Argonaute linker 2 domain 527 573 IPR032472 -
Prci14g1909 1048 Pfam Piwi domain 676 995 IPR003165 GO:0003676
Prci14g1909 1048 CDD Piwi_ago-like 545 995 IPR045246 -
Prci14g1909 1048 ProSiteProfiles PAZ domain profile. 387 501 IPR003100 GO:0005515
Prci14g1909 1048 CDD PAZ_argonaute_like 386 500 - -
Prci14g1909 1048 FunFam protein argonaute 10-like 744 1048 - -
Prci14g1909 1048 Gene3D paz domain 380 505 - -
Prci14g1909 1048 Pfam N-terminal domain of argonaute 194 325 IPR032474 -
Prci14g1909 1048 Pfam Glycine-rich region of argonaut 76 169 IPR024357 -
Prci14g1909 1048 SMART Piwi_a_2 675 996 IPR003165 GO:0003676
Prci14g1909 1048 Pfam Mid domain of argonaute 584 659 IPR032473 -
Prci14g1909 1048 SMART DUF1785_2 334 386 IPR014811 -
Prci14g1909 1048 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 168 997 - -
Prci14g1909 1048 MobiDBLite consensus disorder prediction 137 176 - -
Prci14g1909 1048 Pfam PAZ domain 392 517 IPR003100 GO:0005515
Prci14g1909 1048 Pfam Argonaute linker 1 domain 335 385 IPR014811 -
Prci14g1909 1048 ProSiteProfiles Piwi domain profile. 675 996 IPR003165 GO:0003676
Prci14g1909 1048 Gene3D - 565 738 - -
Prci14g1909 1048 MobiDBLite consensus disorder prediction 1 188 - -
Prci14g1909 1048 SUPERFAMILY PAZ domain 381 541 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1909 Prci-Chr14 26663470 26670963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1909 80 1048 Eukaryotic Initiation Factors Gene Family AT1G48410 79.427 0.0 1563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1909 K11593 - gmx:100778754 1733.77