Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1902 ATGGCTCAGGCGCAGCCAATGGAACAAGTTCAATGTTTCGGTCGCAAGAAGACCGCCGTCGCCGTGACTCACTGCAAGCGCGGCCGTGGACTCATCAAGATCAATGGCTGTCCGATTGAACTCGTGCAGCCGGAGATTCTCCGATTCAAAGCCTTCGAACCCATACTCCTGCTGGGGAAACACCGTTTCGCCGGCGTAGACATGCGTATCAGAGTCAAGGGCGGTGGTCACACCTCTCAGATATACGCCATTCGTCAAAGTATTGCCAAAGCCCTCGTTGCTTACTACCAGAAGTACGTGGATGAACAGAGCAAGAAGGAGATCAAGGATATTCTTGTGCGGTACGATCGAACTCTGCTGGTCGCTGATCCTAGGCGGTGCGAGCCCAAGAAATTCGGTGGTCGTGGTGCTCGCGCCAGGTTCCAGAAATCTTACCGTTGA 441 0.5397 MAQAQPMEQVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1902 146 FunFam 40S ribosomal protein S16 2 146 - -
Prci14g1902 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Prci14g1902 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Prci14g1902 146 Gene3D - 2 146 IPR014721 -
Prci14g1902 146 PANTHER RIBOSOMAL PROTEIN S9 6 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Prci14g1902 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1902 Prci-Chr14 26612872 26613540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1902 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 89.726 4.64e-96 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1902 K02960 - cave:132189857 281.567