Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1872 ATGGCGATGGTTGAAGGCGAGTGGAAGGGAGCTGCACAATGGACAGACATAAATTCCTTCTTTAACAACGAAATTAATGGGGTTTATCTCATCAGAATCCTACTGGAAGTGGAAGTACGATGTGTTTTTGAGCTTCAGAGGCGAAGATACCCGCAACAGTTCACGAGCCATCTGTACGGAGCTCTGTGTCAAAAGGGAATATATACTTTCATAGACAATGAAAAGCTCAAGAGGGGAGAGAAGATTTCCACTGCACTTGAGAGAGCCATTGAAGACTCTAGAATCTCTGTTGTTGTCTTATCCAAAACCTACGCTTTTTCCAGTTCATGCTTAGACGAGGTCCTTAAGATCCTCGAGATCAAGGATTCTAAGGGGCAACTGGTGTTGCCAGTGTTTTACAACATAGATCCATCAGAAGTACGACATCAGAAAAGAAGCTTTCATGACGGTTTCCTCAAACATGAAGATAACTTGGGAATTACAGAAAAGGTTAGCAGGTGGAGGGCAGCCCTGAGTGAAATTGCTTCTTTGTCTGGCTGGCATCTTAATAACGGGAATGAGCCTACATTCATACAAAGAATTGGTGAAGAAATACTCAGTAAGCCGAACCGCACACCTCTGAAAGTAGCTAAACATCCTGTGGGCTTGGAGTCTCCTTTAGAGGACATAAATTCATTGTTGGGTGTCCAATCAGAAAATGATGTGAGGGTTATTGGAATCCATGGTATTGGAGGAATAGGTAAAACAACTTTGGCTAAAGCTCTCTATAACCAGATCTCTTATCATTTTGAGGCCAGCACATTCATTGCAAATGTTAGAGAAATTTCAAAGCAAAACTTCGGCTTAGTTCAACTACAACAAGCTCTTCTTTCAGAAACACTAAACTATAGAGACTTGAAGGTTGGCAATGTAGATAGAGGAATCAACCTCATAAAGAACAGACTCTGTTCTAAAGGAGTTCTCATAGTTCTTGACGATGTAGATTCGATGGAGCAACTTGAATCATTGGTTGGAGAAAACAACTGGTTTGGCTTAGGAAGTAGAGTTATCATAACAACTAGAGATGAACACTTGTTAATTGCTCACAGTGTTGAAGCAATCTACAAGGCTAAGGAATTAAGATATGACCATGCTCTTGAATTGCTCAGCTGGTATGCTTTCAGAAAACCTTATCCTCCCACAAACTATGAGAAACTTTCAATGCACATATTAAACTATGCCAAAGGTCTTCCATTGGCTCTAACCGTGTTGGGGTCATATTTAAGTGGGAAGACTATAGTAGAATGGATGAGTGCGTGA 1299 0.4088 MAMVEGEWKGAAQWTDINSFFNNEINGVYLIRILLEVEVRCVFELQRRRYPQQFTSHLYGALCQKGIYTFIDNEKLKRGEKISTALERAIEDSRISVVVLSKTYAFSSSCLDEVLKILEIKDSKGQLVLPVFYNIDPSEVRHQKRSFHDGFLKHEDNLGITEKVSRWRAALSEIASLSGWHLNNGNEPTFIQRIGEEILSKPNRTPLKVAKHPVGLESPLEDINSLLGVQSENDVRVIGIHGIGGIGKTTLAKALYNQISYHFEASTFIANVREISKQNFGLVQLQQALLSETLNYRDLKVGNVDRGINLIKNRLCSKGVLIVLDDVDSMEQLESLVGENNWFGLGSRVIITTRDEHLLIAHSVEAIYKAKELRYDHALELLSWYAFRKPYPPTNYEKLSMHILNYAKGLPLALTVLGSYLSGKTIVEWMSA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1872 432 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 432 IPR044974 GO:0006952
Prci14g1872 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 431 IPR027417 -
Prci14g1872 432 Gene3D - 372 432 IPR042197 -
Prci14g1872 432 Pfam TIR domain 51 207 IPR000157 GO:0007165
Prci14g1872 432 Pfam NB-ARC domain 220 430 IPR002182 GO:0043531
Prci14g1872 432 PRINTS Disease resistance protein signature 407 421 - -
Prci14g1872 432 PRINTS Disease resistance protein signature 237 252 - -
Prci14g1872 432 PRINTS Disease resistance protein signature 314 328 - -
Prci14g1872 432 SMART AAA_5 234 373 IPR003593 GO:0016887
Prci14g1872 432 Gene3D - 203 367 IPR027417 -
Prci14g1872 432 Gene3D - 44 202 IPR035897 -
Prci14g1872 432 SUPERFAMILY Toll/Interleukin receptor TIR domain 53 180 IPR035897 -
Prci14g1872 432 ProSiteProfiles TIR domain profile. 38 202 IPR000157 GO:0007165
Prci14g1872 432 SMART till_3 42 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1872 Prci-Chr14 26302404 26304909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1872 52 419 WRKY Transcription Factor Family AT4G12020 27.957 2.99e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1872 - - pcin:129292415 847.04