Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1853 ATGAGGCAGCACTGTCCCAACTATTTTGATCAAATGAATTGTGATTCACTGCAGCCAATCCACATGGCACTTGAAGGCGCTTGCTCTTCGTCTTCTTTCATCCACGGGTGGACCTACGATGTCTTTGTAAGCTTCAATGGCGGAGACACTCGTTATGGCTTCACCGGCAACCTTTGTTGGGCTCTGAATCAAAAGGGGATACACATCTTCCGAGACGACGACAGCCTCAGGAAAGGCGAAAGCATTTGCCCAGCTCTTCTGAAGGCGATCGAAGAATCTAGAATCGCCATCATAGTATTCTCCGAGAACTATGCATCGTCAAGCTGGTGCCTGGACGAACTGGTGAAGATAATGGAATGTATGAAGGAGAAGGGACAGAAGGTTCGACCGGTGTTTTATAACGTATATCCTTCAGATGTAAGGCAAGCGAGTGGAAGTTTTGGAAGGTCAATGGCTGAGCATGAAGCCAGGCTCAAGCAAACAGTTCGTGATTGGAGCCTTGCACAAAAAACATTGCAAAACTGGAGAGCTGCGCTTCGGGAGGCTGCCAATTTGGCTGGATGGCATTTCACAGACGGCCGGTATGAGTTTGAGTTTGTTCAAAAAATCACGGAAGAGGTTTCTAAAATATTAAGTCGCACAATTTTACACATAGCTGATCATCCCGTGGGATTGGAGTCTCGAATATTAGAAGTGATATCACTTCTAAGTATTAACTCTAAAAAAGAAGCTTTGATGGTGGGAATTCATGGGATTGCTGGAATTGGTAAAACAACGATCGCCAAAGCAGTGTATAACTCGATTGCTAATCAGTTTGATTCCTCTTGTTTTCTTGGTGAGGTGAGAGAAAACTCAAGGAAGAATGGTCTAGCACAACTACAAGAGACAATTTTTTCGAACTTGCTTGGAGAAAATAATATCAAGTGCAGCAACGTAAGTCAAGGAATTCCTATATTAGAAAAGAGATTTCGTTTCAAGAAGATTCTTTTGATTCTTGATGATGTTGATGATTTTAGACAAGTGAAATCTTTAGCTGGAAGAAAAGATTGGTTCGGGCAGGGAAGTAGGATAATTATAACAACAAGAAATGAACATTTCTTAAGACAACATGGGGTTGAAATTCTGCATGAAGTGAAAGGACTGGAAGATGATGAATCACTTGAATTGTTTAGTTGGAATGCCTTCAAAAAAAGTGAACCTGATCCAAGCTATGCGGAGATAGCAAAGCATGTAGTGAAATATGCCCAAGGCTTACCATTGGCTTTGAATGTTATAGGTTCTGATTTGTTTGGCAAAACGATCCAAGAGTGGAAACTTGTTTTGATGAAATATGGTATTGGAATCCTTGAAGAGGAATCTCCAAGAGTTGGGAATGGGTTTTGTACAGGAATTCCCTTAGTTCAGAACTCAAGAGTTTCTAGGGTCCTTAAACTTCTTGCTAACAACAATTTCAGATTGCTAGAGTGGAATGAACATCAGTCGCTATCTTTACCAACTGAGCATTATCCAGAGATACTTCCTGTTCTCAACGCGCCTCATTGCCATATAACTAATTTGATGGACCTCAGTGACAGTGGTTCTATTACAAGAATACCAGATGTCTCTACAGCACTTCTTACTAGCAAATGTCCAACCTTAGCTGAAATTTTTGATCAATTTATTGGAAATCTGGGCACACTGCTTATTGAAAATTGCCTCAAACTTGAGCGTTTGCAACCTGCAGGAATGAGTTCTGCATCTCTTGAACCTCTAAATCTTGGAAAACGCTCTAACTTGCCGAGTTTCTCGAATAAGTTGGCAGAAAAGGAAGATATGAAACATGCCGGCACACAAGGGACTTCCATAAAAGTCTTTCACAATTCAATAACAAAGATTGATGGTCTTCAAGAGCTAGTTTTGAAATCTTCTGCTGAGGATCCTCATATCCACACTGACATGTTTCATAATACTGAAGAAGATAATGTGGAAGAATGTTCATCAGGTCCAAAGCTGCTGGGGAAGATAGTAATGATGTATTGGACAAATTGGGCACCGAAGTTAAATAAACTGGTTTTAGAAAATTGTGATTTATCTGATAATGATCTCGAGCTGTTTCTCAGTTCCTTTTTAAAATTGAAGTGGTTGATACTATCAAACAACAACTTTGTAACCATTCATGAGTGCATTAAAGAACTTGCAAACCTTCTTTTTCTTTGTGTGAAAAATTGCAAGCAGCTTAGATACGTTTCTGTGCTTCCACCTTACTTGCAACACATAGATGCAAGGAACTGCATATCATTGACTCAGGATTCATTCGACGTAATATTAAGTCAGGCATTTCAAGAGGTGGAGAACATGGACATTGTAGTGTGGAGGAAGCGAATCCCAAAGTGGTTCGACTATTGTGGCAGAGGAGGATCTGTGGGTTTTTGGGTTCGCCGAGAATTCCCTGGAATTGCGGCACTTTTGGTTCTAGGGGGTCAAACTGAAGTAGAAACCAATTTTACATGTGAATTCACACTGACCATCAATGACATTCAAGTGCTAAAAGGTGAAAGAACGTTGCCGAGGGACCATGTCTGGCTGTTTGACCTGCGAATTCACTTAACAGCCAAAGAGAGGCATTACATCAACAAGCATCTTCACAGAAGTTGGAACCATGTGGGGATTTCATGTACTGCTAAGAACAATCATCCACACAATTCCATTGTTAGATTCAGTGGCATTCATCTCTCTAAGGATAGAATGAACATCCACGACGTCTCCTTCATAAGCCCTGATCTTCGGGGTTCAGATATTGCCCGTCACAAAATGGAAAATAATGATGCCGACATTTATGAAGTAAGTGGTGGACACGCTGCTTTTGATCAAGCATCAGCTGAGCTTGTTGACAAGAAGATTGTAAGTTTGATGGAAGGATCTAGCAGAGCAGATGATGAGGACGAGGAAGAATATTTGACTGGAACTGAGAATGAAGACCCAGAAAGACGTGACGTAGTGGTCAAGGACAGAGGAAAAGGAACAGTAAAATACAGTGACCTCGCTGAGGAAGAACAAAATAAGGATTTTTTTATTGAAAGTGCAACAGGAAGCTGGAGAAGAGCAAACTTGAGCAGGAGTCAACTTCCTTTGCCTATGCAAGCAAAAACAATGGTACTTCCAACATTAAGAATCCCGAAAAGATTGGCTTCACAAGGACGAAAGGAAACCCAGAAGCAGGGGAATCTCACATGCATATTCCAGAATCTAGAGCATTTCTACAGTTGGAGTCAAAAGACGCTGGTGATAGTTTGA 3273 0.4109 MRQHCPNYFDQMNCDSLQPIHMALEGACSSSSFIHGWTYDVFVSFNGGDTRYGFTGNLCWALNQKGIHIFRDDDSLRKGESICPALLKAIEESRIAIIVFSENYASSSWCLDELVKIMECMKEKGQKVRPVFYNVYPSDVRQASGSFGRSMAEHEARLKQTVRDWSLAQKTLQNWRAALREAANLAGWHFTDGRYEFEFVQKITEEVSKILSRTILHIADHPVGLESRILEVISLLSINSKKEALMVGIHGIAGIGKTTIAKAVYNSIANQFDSSCFLGEVRENSRKNGLAQLQETIFSNLLGENNIKCSNVSQGIPILEKRFRFKKILLILDDVDDFRQVKSLAGRKDWFGQGSRIIITTRNEHFLRQHGVEILHEVKGLEDDESLELFSWNAFKKSEPDPSYAEIAKHVVKYAQGLPLALNVIGSDLFGKTIQEWKLVLMKYGIGILEEESPRVGNGFCTGIPLVQNSRVSRVLKLLANNNFRLLEWNEHQSLSLPTEHYPEILPVLNAPHCHITNLMDLSDSGSITRIPDVSTALLTSKCPTLAEIFDQFIGNLGTLLIENCLKLERLQPAGMSSASLEPLNLGKRSNLPSFSNKLAEKEDMKHAGTQGTSIKVFHNSITKIDGLQELVLKSSAEDPHIHTDMFHNTEEDNVEECSSGPKLLGKIVMMYWTNWAPKLNKLVLENCDLSDNDLELFLSSFLKLKWLILSNNNFVTIHECIKELANLLFLCVKNCKQLRYVSVLPPYLQHIDARNCISLTQDSFDVILSQAFQEVENMDIVVWRKRIPKWFDYCGRGGSVGFWVRREFPGIAALLVLGGQTEVETNFTCEFTLTINDIQVLKGERTLPRDHVWLFDLRIHLTAKERHYINKHLHRSWNHVGISCTAKNNHPHNSIVRFSGIHLSKDRMNIHDVSFISPDLRGSDIARHKMENNDADIYEVSGGHAAFDQASAELVDKKIVSLMEGSSRADDEDEEEYLTGTENEDPERRDVVVKDRGKGTVKYSDLAEEEQNKDFFIESATGSWRRANLSRSQLPLPMQAKTMVLPTLRIPKRLASQGRKETQKQGNLTCIFQNLEHFYSWSQKTLVIV 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1853 1090 MobiDBLite consensus disorder prediction 965 988 - -
Prci14g1853 1090 ProSiteProfiles TIR domain profile. 37 211 IPR000157 GO:0007165
Prci14g1853 1090 Gene3D Ribonuclease Inhibitor 610 782 IPR032675 -
Prci14g1853 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 447 IPR027417 -
Prci14g1853 1090 Gene3D - 35 208 IPR035897 -
Prci14g1853 1090 Gene3D - 380 452 IPR042197 -
Prci14g1853 1090 Pfam NB-ARC domain 229 442 IPR002182 GO:0043531
Prci14g1853 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 35 213 - -
Prci14g1853 1090 SMART till_3 38 185 IPR000157 GO:0007165
Prci14g1853 1090 Pfam TIR domain 39 210 IPR000157 GO:0007165
Prci14g1853 1090 PRINTS Disease resistance protein signature 723 739 - -
Prci14g1853 1090 PRINTS Disease resistance protein signature 415 429 - -
Prci14g1853 1090 PRINTS Disease resistance protein signature 246 261 - -
Prci14g1853 1090 PRINTS Disease resistance protein signature 322 336 - -
Prci14g1853 1090 Gene3D - 209 374 IPR027417 -
Prci14g1853 1090 SUPERFAMILY L domain-like 471 762 - -
Prci14g1853 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 443 IPR044974 GO:0006952
Prci14g1853 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 188 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1853 Prci-Chr14 26132055 26138748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1853 39 451 WRKY Transcription Factor Family AT4G12020 27.619 4.46e-35 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1853 - - pcin:129292213 2191.39