Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1787 ATGAGTGGGAAAAAAAGAGAAGAATATTCGGCAACGGAGAAAGAGGAAGATGAAGAAGAAGAGAGAGATCACGAAATCCTCAAGACCAGAATCTCTAACCATCCACTCTATGACCTTCTTGTTCAACAACACCTCAACTGTTTGAAGGTGAGTGACATTTCCAACTTGGAAAAAGTGAAGAAGAAGAAAGCAATGAAGAAGCAAAACCTGGGCTTGTGTAGTCATTCAGAGCTCGATCACTTCATGGAAGCATATTGTATGGCACTAGGGAAGCTGAAAGAAGCAATGGAAGAACCACAAATAGAGTCCTTGGATTTCATCAACAACATGCATTCTCAACTCAGAGACCTCACTGCATTAACACTATCTTCTTCTTCTCCTTCTTCTCATCATCAATCTTCCTCTCCTCACTCCAACTTCCAAACACATCCTTGA 435 0.4115 MSGKKREEYSATEKEEDEEEERDHEILKTRISNHPLYDLLVQQHLNCLKVSDISNLEKVKKKKAMKKQNLGLCSHSELDHFMEAYCMALGKLKEAMEEPQIESLDFINNMHSQLRDLTALTLSSSSPSSHHQSSSPHSNFQTHP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1787 144 Pfam KNOX2 domain 75 118 IPR005541 GO:0003677|GO:0005634
Prci14g1787 144 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 7 120 - -
Prci14g1787 144 SMART KNOX2_2 68 119 IPR005541 GO:0003677|GO:0005634
Prci14g1787 144 MobiDBLite consensus disorder prediction 122 144 - -
Prci14g1787 144 SMART KNOX1_2 25 65 IPR005540 GO:0003677|GO:0005634
Prci14g1787 144 Pfam KNOX1 domain 27 50 IPR005540 GO:0003677|GO:0005634
Prci14g1787 144 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1787 Prci-Chr14 25340287 25342038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1787 23 114 Homeobox Transcription Factor Family AT4G08150 34.653 4.31e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1787 - - gsj:114417717 144.05