Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1780 ATGGTGAGGCTAGATAGAGCAGGAACGAACAAGAGCTTAGAGAGTTTATTGGAGCTGAACAAGGTTAAAACGACGACGACGAAGAAGCAACTGAGGCCGCAGAAGTCTATTCCCGGGTATGGCCTGGAGTTCAATAATCTGTCGTATAGTGTGGTGAAGAAGGTGAAGAAAGATGGAGTTTGGGTAAAGAAAGAAGCCTATCTTCTTCATGATATATCTGGTCAAGCAATGAGAGGCGAAGTTATGGCGATCATGGGACCTAGTGGTGCCGGAAAGTCCACTTTTCTTGATGCGTTGGCTGGTCGAATTGCACAAGGCAGCTTGGAAGGATCAGTCAGAATTGATGGAAAACCAGTGACAACAAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGATGACCAGCTGTTTCCCATGTTGACTGTTTTTGAGACATTTATGTTCGCAGCTGAGGTCAGGCTTCCTCCTTCTATTTCCAGAGAGGAAAAGAAGAAAAGGGTTTACGAGCTCCTTGATCAGCTTGGCTTGCAGAGTGCGACACATACATATATAGGTGATGAGGGGAACAGAGGAGTATCAGGAGGAGAACGACGAAGGGTTTCCATTGGCATAGACATAATCCACAAGCCATCACTTCTGTTCCTTGATGAACCAACCTCAGGTCTTGATTCAACAAGTGCTTATAGTGTCGTCGAAAAGGTTAAGGATATTGCTCGAGGTGGAAGCATCGTGCTCATGACCATTCATCAGCCCTCCTACAGAATTCAAATGCTCCTAGACCGAGTCACTATCCTTGCAAGGGGAAGATTGATATACATGGGAGAGCCAAGTGCAGTCACTTCTCATCTTTCTGGGTTTGGAAGAACAGTACCTGATGGAGAAAACAGCTTAGAATATCTCCTAGATGTAATAAAAGAATTTGATGAATCCAACGTTGGACTCGACCCACTTGTTCAATACAATCTTGACGGCCTGAAGCCTGACCAAGCTGCCAAGACACCATGGAAGACACCAAGAACAATTTATAAAAAGATCAGCAACACACCCGCATCAAAGCACATGATTAGCCTGAAAAGCCAGGGCTTCAAAGCTGGAACAACACAGCCTGCAGATTCTGCACAATTTAGCTATAACATTCATGGTGATCATGAAGATGATGTCGATGATGAGGACTTTGATAACTCTCTTGAAAGGAAAAGTGTTCACACCCCTAGGACTTGTAATACCATGACCAGCGGTGTCTATCCTCGTTTGGCTTCTCAGTTTTATAAGGATTTCTCTGCCAAAGATTTCTCTGTTTGGCTTTACCATGGTGTGATAGGAACCCCTCGCCGCCCATCCTGGACTCCGGCTAGAACACCGGGTTGGACGCCGGCGAAAACTCCTATGTCCGGACTAGGAAGCACTGTTTTGATGAACCAGTTTTCAGCATCATACGAGGAGCCTTATCATCATCCCAAAACACCATCTATGGTTAGTCAATCGTTTGCCTTGGACTCCTGCGTAAGTTCCTATGAGGAGTTTGACATTGAAGTTCTTGATGAGCCAAACGTTGGGCCAAAGTACGCTAATCCATGGCTTCGTGAGGTCGCAGTGCTTTCATGGCGAACTGCCCTGAACGTGATTCGAACCCCAGAACTGTTCCTTTCTCGTGAGATTGTTCTAACTGTAATGGCTCTCGTCCTCTCCACCATCTTCAAGAACCTAAGTCACCCCACCTTCAAAGAGATCAACAGGATTCTCAACTTCTACATTTTCTCGGTGTGCCTCGTCTTCTTCTCCTCCAACGACGCCGTTCCATCGTTCATCCTCGAGAGATTCATCTTCATCAGGGAAACCTCCCATAATGCTTATCGTGCTTCTTCATACGTGATCTCTTCACTGATTGTTTATCTCCCATTCTTCGCAATCCAAGGCCTCACATTCGCTCTCATAACCAAATTCATGCTTCGCCTCAAAAGCAGTCTTTTCTATTTCTGGTTGATTCTTTATGCTTCTCTCATCACCACCAATGCTTACGTCATGCTAGTCAGTGCTCTTGTTCCCAGTTATATCACAGGCTATGCTGTGGTGATCGCCACGACGGCATTATTCTTTCTGACTTGTGGCTTCTTCCTCAAGAGAACTCAGATTCCTCCGTACTGGAAATGGCTTCACTATATTTCTGCGATAAAGTATCCGTTTGAAGCATTGTTGACTAATGAGTTTAAGAATGAACGGTGCTACACAGGGAGCTTATCGGATTTGTCTCCGGGGCCATTGGGAGATGTGAAGAAGAGTGAAGGACATGATAGGTCGAACTGTCCGATTGGCTTAATCGGAGAAGATGTTTTGGCCACCATGGATATTCAGATAGAGAAGATTTGGTTTGATGTAGCGATTCTTCTGGCTTGGGGTGTCCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGGAAGTGA 2463 0.4507 MVRLDRAGTNKSLESLLELNKVKTTTTKKQLRPQKSIPGYGLEFNNLSYSVVKKVKKDGVWVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSATHTYIGDEGNRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSYRIQMLLDRVTILARGRLIYMGEPSAVTSHLSGFGRTVPDGENSLEYLLDVIKEFDESNVGLDPLVQYNLDGLKPDQAAKTPFXKTPRTIYKKISNTPASKHMISLKSQGFKAGTTQPADSAQFSYNIHGDHEDDVDDEDFDNSLERKSVHTPRTCNTMTSGVYPRLASQFYKDFSAKDFSVWLYHGVIGTPRRPSWTPARTPGWTPAKTPMSGLGSTVLMNQFSASYEEPYHHPKTPSMVSQSFALDSCVSSYEEFDIEVLDEPNVGPKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKNLSHPTFKEINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQGLTFALITKFMLRLKSSLFYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPPYWKWLHYISAIKYPFEALLTNEFKNERCYTGSLSDLSPGPLGDVKKSEGHDRSNCPIGLIGEDVLATMDIQIEKIWFDVAILLAWGVLYRFFFYLVLRFYSKNERK 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1780 821 Pfam ABC-2 type transporter 532 738 IPR013525 GO:0016020|GO:0140359
Prci14g1780 821 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Prci14g1780 821 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Prci14g1780 821 SMART AAA_5 78 278 IPR003593 GO:0016887
Prci14g1780 821 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Prci14g1780 821 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 808 - -
Prci14g1780 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 284 IPR027417 -
Prci14g1780 821 Gene3D - 41 288 IPR027417 -
Prci14g1780 821 FunFam ABC transporter G family member 6 57 284 - -
Prci14g1780 821 Pfam ABC-2 type transporter 250 307 IPR043926 GO:0140359
Prci14g1780 821 CDD ABCG_EPDR 42 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1780 Prci-Chr14 25243439 25246915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1780 79 275 Calmodulin-binding Proteins AT2G36910 25.000 4.83e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1780 K05681 - gmx:100819497 1242.25