Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1755 ATGCATGGTAATGTCGATCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTCGACCTTCTTGGTCAGATGAGAGAGCGACTAATTGCAGAGAACAGACAGACGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCGGAACTGCAAATACAGGCTTATCTTAAAACTGTTGCTTTTCGTCGGGAGATAAATGAAGTGCAGAAAGCTGCCGCAGGGGGAGCAGTTGGTGGTGTACGGACTTCTCGTATTGCATCTGAAGCCAACAGAGAGTACATATTTTCGACATCTTTTACCGGTGATAAGCAAGAACTTACTTCTACCAAATTAGAGAAAAATAAGGATGCACATCAGAAGACACTAGGAAACCATTTTTCTCAGGCTTTTGTTAATAACAGTGGTCCTGCCAATGATTCTTGTACCACAAGTGGATTAGTTTGCAGTGAAGGTGGAAGTCCATCTGATGAGAATATCCAAACGTATGTGGATGAGAGGGGCCAATTTCGTGTTAGTAGACTTAGAGCTATGGGGATGCGTATGACCCGTGACATACAAAGAAATTTGGATCTGATGAAGGAGATTGAGATGGAAAGAACAGTTGCAAATAAGGTAGAAAATAATAATTCAATTCTTAGTGGAAAGAAAAGTGTTGCATCAAAAAGTTTTAACAACCTGCTTGTTGGTGGCCCGGACAGGTCAGATGCTGACTTGGTTGGTGATAATTCTAGAAATGAACACCCTGCATCAGCAGGGGATGCTTCTTTGGAAATATCCTTCATGGATGATGGTGATAACAAGGGCCTTGATGATGATGATTTATTTACTAGTTTAGTAGCAGGAAATTCAGTAGTATTTTCCTCTGCTGACAAGACCTCAATGAAAGAACAAGTTTCTGATTCTAGTTCTGATTGTGACTGGGAAGAAGGAATTGTTGAAGGTAAAAGTGATGTGAATGAGGAAATAAAACAATCTGTTGTAAAAGATAATTATAATGACGAATCTGATGTAGAATGGGAGGATGGAGTTTGTGATGGTGCTAAGACAACGACGTGTGCAGCTGAGGCACACAGAGCAACATCTCGAGGTTGCTTGGAGGAGGAGGCTGATTTACAGGAGGCAATACGGAGAAGTCTTGAGGTCATGGGGGACCACAAACTTAATTGCACATCATCCAGTTTTGAACATTCAAATGCCGATAGGGACAAATCAGATTATGAATTAAACCAAGATGATAATTTGGTTGATTCTGGAGTGAAGGGTATTTGTGGCAATTTTGGTGTGCTGAATAGAGACATCAGAATGGGTGAGTCCACTTTGCAACGGGAAGATAACACTAAACACAGTGAATATAAAATTATTGACAATGACAATAAGCTGGATAACACAGTGAGAAGCAACATACAAGTTTCCCAGTCTCCTCAGGGACAGTCAAAGCCATCTGTGGCATTTGATTGCGAGAAGATGGTGTCATTTATTAAGAAGCCTTGTTCATTGGAGATAGGACCACATTCTGAAGATTTACTGTACAATGCAAATGAAAGCAGGAGAAATGTGATTCACAATGTTGCTGAGCAACTCGTGGGTACCTTAAATGAACATGGCAATGTGTCTACCAATGGCGACAAATCTCCTGTAGCTGACTCCCTTGGTGCTTCAGAAGAGGAGATAAAGAATTGTAGCAATGAAGCTGAACCTTTTGGTAATTATTCTGAGATGCCTGAGCCTGTTGCTCCTTTTGTGGATTCCTCCTTGGAAGGATTAACAGAAGACCGTGACACTGAGCCAGAGTTGCCTAGAGATGACAACTGTGGAAGCATTGATAAAAGGAAGAGTAATGTCGGTATAGATGCAATGGAGCCCCCAGGTTTTTTCTCTGCTGAAAACCTTGAAACTCACTCGGAGCTGCCTAGGGAGGATAACCATGGAAGCTTTGGAGAAATCAAGAACAACCTTGTCAAAGATGCAATGGAAGCCCCAGGTCACTTGTTTGTAGATGCGGTTGATCGTGGTTTGGAGGAAGAAATCCGAATTCTTGGTCAAGAATATTCCAACCTAGAATATGAGCAGAGGAAGCTTGAACGCAATGCAGAATCTGTCAACAGTGAATTATTCACTGAATGTCAGGAACTATTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAGCTTGCAAAACTGGTGGATGGTGTTGTGACTGATGACTCTGATGTCTTTTTATTCGGGGCACGTAGTGTCTACAAGAATATATTTGATGACCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAGCTTGGATTGACCAGAGAAAAATTAATCCGCATGGCTTTGCTTCTGGGAAGTGATTATACTGAGGGTGTAAGTGGAATTGGAATTGTAAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTTCTGAAATTCCGGCAGTGGGTTGAGTCACCTGATCCCACCATCTTTGGAAGGTTTGAAACAAAAAGAGGATCCACCACCCGAAAGAAAGGGTCAAAAGTTGAAGAAAACGTTACTGGCACAAATTGCAATGTAGAAGAGACTATGGTGGATCAAAATGTTTTCCATGCTCAGGAACAAAATGACTCATCAGATGACATCCAAGAAATCAAGCAGATTTTTATGAATAAACATAGAAATGTGAGCAAGAATTGGCACATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTATTCTTGTCCTCAAGTGGACAAGTCAACGGATCCATTTGCTTGGGGAAAGCCAGATCATCTTGTTCTTCGCAAATTGTGCTGGGAGAAGTTTGGCTGGACTAGTCAGAAAGCAGATGAGTTGCTTTTACCTGTTTTAAAAGAATATAACAAGCATGAGACTCAACTGCGATTGGAAGCATTTTATAGTTTCAATGAAAGATTCGCAAAAATTCGCAGTAAGCGAATTAAGAAAGCAGTGAAAGGAATCACTGGAAATCACTCTTCAGAGTTGACAAATGAATCTGCGGAGAACTTGCTGTCAAAGAGTGGGAAGAATGATACAGGAATTCCTGCTGAACTTGGGATTAGCATATCAGAGACTTTTAAGGAAACAGGAGAAAGCGTTGCTGACATGAAGCCATTGAATTTGAAACAGTCAAGGAAAAGGAAGAATTCTCGTGATACTGTTGCTAAGACACAGTCAAGGAAAAAGGGTAAATTGAATGCTCCTGCCACAGCTTCTGGTCTGACTGAGGTAGATGTGCAGACAGGAGAAGAGCCAACTCAGCCAAGAGATGGGGGTGGTTTGAGAAGTAGCAAAGGCAGAGGCAAAGGTGTGGGAGTTCAAAGAGGAAGGAGGAAGAGAAGTCTTGGTTTTGATTCACGTAAAACTACATCTAGTGATAGTGACAGTGATGACCATGAGTCCGAAGTGCATGGTAGAAACTCAAGAGGGACAGAAGAGGTGCGAAGGTCTATGCGTTCTCGGAAGATTGTCAACTATTCCATGGACAACGTTGAAATTGAAGATGCTGATGCCTCAATTGATCTGAGCAACAAGACAGACTTGAACGAAGAGCCGATAGATGAAATATTTTCTGGGATGCATGGTGTTTGTGGCAATGCTGACTCTGGTTTCAGCGGACACAAGGAAAACACAATAAATCTTTCTCCAAAGAAGGATTTGTCTAGAAGCTATCTGGAATCAAGTGGGGGTTTCTGTACTGATGGAGAAAAAACTAATGCAGGAGCGAACAATTTTGATAGCTCTCGTGATGCCGACTACTGTAAAGTGGGCGGTGGATTTTGCCTCGATGAGGATGAGACAGGTAGCAAACATAATGAAATTCACGACGACAACTACCTAAGAGAGGGAGGTGGATTTTGCCTAGATGATGATGAGACAGGTGGCAAATGTAATGAAATTAATGACAACTCGGCAACTATGGTAGAGGATAGTGCAGAGCTCACTCATGGTTCTTCTGGTTTTGTGGATGAGGCTGAATGTGATAAAAATATTACTTGTCAATCAAGTTCAGCCGATAAAGCATCTGGAATTGAACTGCAAGATAGAGGAACAACTAAACACAAGATTGAGATGAATCATGACTGTAATTATGATCAGTCTGAGTCTGACACTGGGGTTTTCATGTCAGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGTCATGTCGGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGCGATGCCTTTTCTAAGAAAGAAAAGGAGGAAGAGCTGA 4317 0.4186 MHGNVDPAVLASLPPSMQLDLLGQMRERLIAENRQTYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKAAAGGAVGGVRTSRIASEANREYIFSTSFTGDKQELTSTKLEKNKDAHQKTLGNHFSQAFVNNSGPANDSCTTSGLVCSEGGSPSDENIQTYVDERGQFRVSRLRAMGMRMTRDIQRNLDLMKEIEMERTVANKVENNNSILSGKKSVASKSFNNLLVGGPDRSDADLVGDNSRNEHPASAGDASLEISFMDDGDNKGLDDDDLFTSLVAGNSVVFSSADKTSMKEQVSDSSSDCDWEEGIVEGKSDVNEEIKQSVVKDNYNDESDVEWEDGVCDGAKTTTCAAEAHRATSRGCLEEEADLQEAIRRSLEVMGDHKLNCTSSSFEHSNADRDKSDYELNQDDNLVDSGVKGICGNFGVLNRDIRMGESTLQREDNTKHSEYKIIDNDNKLDNTVRSNIQVSQSPQGQSKPSVAFDCEKMVSFIKKPCSLEIGPHSEDLLYNANESRRNVIHNVAEQLVGTLNEHGNVSTNGDKSPVADSLGASEEEIKNCSNEAEPFGNYSEMPEPVAPFVDSSLEGLTEDRDTEPELPRDDNCGSIDKRKSNVGIDAMEPPGFFSAENLETHSELPREDNHGSFGEIKNNLVKDAMEAPGHLFVDAVDRGLEEEIRILGQEYSNLEYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTIFGRFETKRGSTTRKKGSKVEENVTGTNCNVEETMVDQNVFHAQEQNDSSDDIQEIKQIFMNKHRNVSKNWHIPSSFPSETVISAYSCPQVDKSTDPFAWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGNHSSELTNESAENLLSKSGKNDTGIPAELGISISETFKETGESVADMKPLNLKQSRKRKNSRDTVAKTQSRKKGKLNAPATASGLTEVDVQTGEEPTQPRDGGGLRSSKGRGKGVGVQRGRRKRSLGFDSRKTTSSDSDSDDHESEVHGRNSRGTEEVRRSMRSRKIVNYSMDNVEIEDADASIDLSNKTDLNEEPIDEIFSGMHGVCGNADSGFSGHKENTINLSPKKDLSRSYLESSGGFCTDGEKTNAGANNFDSSRDADYCKVGGGFCLDEDETGSKHNEIHDDNYLREGGGFCLDDDETGGKCNEINDNSATMVEDSAELTHGSSGFVDEAECDKNITCQSSSADKASGIELQDRGTTKHKIEMNHDCNYDQSESDTGVFMSENAHGNTENATAAFRVMSENAHGNTENATAAFRAMPFLRKKRRKS 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1755 1438 MobiDBLite consensus disorder prediction 1128 1167 - -
Prci14g1755 1438 SUPERFAMILY PIN domain-like 686 797 IPR029060 -
Prci14g1755 1438 Gene3D - 666 781 - -
Prci14g1755 1438 FunFam DNA repair protein UVH3 782 839 - -
Prci14g1755 1438 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 733 753 IPR006084 -
Prci14g1755 1438 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 712 729 IPR006084 -
Prci14g1755 1438 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 787 802 IPR006084 -
Prci14g1755 1438 SMART xpgineu 713 782 IPR006086 GO:0004518
Prci14g1755 1438 MobiDBLite consensus disorder prediction 590 615 - -
Prci14g1755 1438 FunFam DNA repair protein UVH3 663 781 - -
Prci14g1755 1438 SMART HhH_4 784 817 IPR008918 GO:0003677|GO:0003824
Prci14g1755 1438 CDD PIN_XPG_RAD2 699 783 - -
Prci14g1755 1438 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 1174 - -
Prci14g1755 1438 MobiDBLite consensus disorder prediction 590 608 - -
Prci14g1755 1438 MobiDBLite consensus disorder prediction 1046 1167 - -
Prci14g1755 1438 MobiDBLite consensus disorder prediction 230 254 - -
Prci14g1755 1438 CDD H3TH_XPG 785 929 - -
Prci14g1755 1438 Coils Coil 676 703 - -
Prci14g1755 1438 MobiDBLite consensus disorder prediction 1057 1076 - -
Prci14g1755 1438 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 782 991 IPR036279 -
Prci14g1755 1438 ProSitePatterns XPG protein signature 2. 716 730 IPR019974 GO:0016788
Prci14g1755 1438 Pfam XPG I-region 716 797 IPR006086 GO:0004518
Prci14g1755 1438 Gene3D - 782 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1755 Prci-Chr14 24979500 24987937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1755 707 814 Core DNA Replication Machinery Family AT5G26680 36.036 2.20e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1755 K10846 - gmx:100820295 1291.56