Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1754 ATGCAACTTGATATTCTCTCTCAGCTTAAAGGGAAAAAAATAGAAGGACTACTGAAGGATTCTAACAACCAGAAACAATGTGAAGTGAATGACAATGGTGAGGGGATTCTGTCTCGTGAAAATGACACAGTAGGATGTAGCTCAAGTAGTGATGGTATGATAGCAGAGAAACACAATCGAGACAAAATAGATGAAATGTTGGCTGCATCTATTTTGGCTGAGGAAAATGAAAAGTTAGTAAACAAAGCATCAACGTCTGGTGGGGCTTTCATCTCTGAGGAAGAGGAGTACATTAATGAGGAAGATGAAGAGATGATCTTGCCAGCAATGCATGGTAATGTCGATCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTCGACCTTCTTGGTCAGATGAGAGAGCGACTAATTGCAGAGAACAGACAGACGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCGGAACTGCAAATACAGGCTTATCTTAAAACTGTTGCTTTTCGTCGGGAGATAAATGAAGTGCAGAAAGCTGCCGCAGGGGGAGCAGTTGGTGGTGTACGGACTTCTCGTATTGCATCTGAAGCCAACAGAGAGTACATATTTTCGACATCTTTTACCGGTGATAAGCAAGAACTTACTTCTACCAAATTAGAGAAAAATAAGGATGCACATCAGAAGACACTAGGAAACCATTTTTCTCAGGCTTTTGTTAATAACAGTGGTCCTGCCAATGATTCTTGTACCACAAGTGGATTAGTTTGCAGTGAAGGTGGAAGTCCATCTGATGAGAATATCCAAACGTATGTGGATGAGAGGGGCCAATTTCGTGTTAGTAGACTTAGAGCTATGGGGATGCGTATGACCCGTGACATACAAAGAAATTTGGATCTGATGAAGGAGATTGAGATGGAAAGAACAGTTGCAAATAAGGTAGAAAATAATAATTCAATTCTTAGTGGAAAGAAAAGTGTTGCATCAAAAAGTTTTAACAACCTGCTTGTTGGTGGCCCGGACAGGTCAGATGCTGACTTGGTTGGTGATAATTCTAGAAATGAACACCCTGCATCAGCAGGGGATGCTTCTTTGGAAATATCCTTCATGGATGATGGTGATAACAAGGGCCTTGATGATGATGATTTATTTACTAGTTTAGTAGCAGGAAATTCAGTAGTATTTTCCTCTGCTGACAAGACCTCAATGAAAGAACAAGTTTCTGATTCTAGTTCTGATTGTGACTGGGAAGAAGGAATTGTTGAAGGTAAAAGTGATGTGAATGAGGAAATAAAACAATCTGTTGTAAAAGATAATTATAATGACGAATCTGATGTAGAATGGGAGGATGGAGTTTGTGATGGTGCTAAGACAACGACGTGTGCAGCTGAGGCACACAGAGCAACATCTCGAGGTTGCTTGGAGGAGGAGGCTGATTTACAGGAGGCAATACGGAGAAGTCTTGAGGTCATGGGGGACCACAAACTTAATTGCACATCATCCAGTTTTGAACATTCAAATGCCGATAGGGACAAATCAGATTATGAATTAAACCAAGATGATAATTTGGTTGATTCTGGAGTGAAGGGTATTTGTGGCAATTTTGGTGTGCTGAATAGAGACATCAGAATGGGTGAGTCCACTTTGCAACGGGAAGATAACACTAAACACAGTGAATATAAAATTATTGACAATGACAATAAGCTGGATAACACAGTGAGAAGCAACATACAAGTTTCCCAGTCTCCTCAGGGACAGTCAAAGCCATCTGTGGCATTTGATTGCGAGAAGATGGTGTCATTTATTAAGAAGCCTTGTTCATTGGAGATAGGACCACATTCTGAAGATTTACTGTACAATGCAAATGAAAGCAGGAGAAATGTGATTCACAATGTTGCTGAGCAACTCGTGGGTACCTTAAATGAACATGGCAATGTGTCTACCAATGGCGACAAATCTCCTGTAGCTGACTCCCTTGGTGCTTCAGAAGAGGAGATAAAGAATTGTAGCAATGAAGCTGAACCTTTTGGTAATTATTCTGAGATGCCTGAGCCTGTTGCTCCTTTTGTGGATTCCTCCTTGGAAGGATTAACAGAAGACCGTGACACTGAGCCAGAGTTGCCTAGAGATGACAACTGTGGAAGCATTGATAAAAGGAAGAGTAATGTCGGTATAGATGCAATGGAGCCCCCAGGTTTTTTCTCTGCTGAAAACCTTGAAACTCACTCGGAGCTGCCTAGGGAGGATAACCATGGAAGCTTTGGAGAAATCAAGAACAACCTTGTCAAAGATGCAATGGAAGCCCCAGGTCACTTGTTTGTAGATGCGGTTGATCGTGGTTTGGAGGAAGAAATCCGAATTCTTGGTCAAGAATATTCCAACCTAGAATATGAGCAGAGGAAGCTTGAACGCAATGCAGAATCTGTCAACAGTGAATTATTCACTGAATGTCAGGAACTATTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAGCTTGCAAAACTGGTGGATGGTGTTGTGACTGATGACTCTGATGTCTTTTTATTCGGGGCACGTAGTGTCTACAAGAATATATTTGATGACCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAGCTTGGATTGACCAGAGAAAAATTAATCCGCATGGCTTTGCTTCTGGGAAGTGATTATACTGAGGGTGTAAGTGGAATTGGAATTGTAAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTTCTGAAATTCCGGCAGTGGGTTGAGTCACCTGATCCCACCATCTTTGGAAGGTTTGAAACAAAAAGAGGATCCACCACCCGAAAGAAAGGGTCAAAAGTTGAAGAAAACGTTACTGGCACAAATTGCAATGTAGAAGAGACTATGGTGGATCAAAATGTTTTCCATGCTCAGGAACAAAATGACTCATCAGATGACATCCAAGAAATCAAGCAGATTTTTATGAATAAACATAGAAATGTGAGCAAGAATTGGCACATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTATTCTTGTCCTCAAGTGGACAAGTCAACGGATCCATTTGCTTGGGGAAAGCCAGATCATCTTGTTCTTCGCAAATTGTGCTGGGAGAAGTTTGGCTGGACTAGTCAGAAAGCAGATGAGTTGCTTTTACCTGTTTTAAAAGAATATAACAAGCATGAGACTCAACTGCGATTGGAAGCATTTTATAGTTTCAATGAAAGATTCGCAAAAATTCGCAGTAAGCGAATTAAGAAAGCAGTGAAAGGAATCACTGGAAATCACTCTTCAGAGTTGACAAATGAATCTGCGGAGAACTTGCTGTCAAAGAGTGGGAAGAATGATACAGGAATTCCTGCTGAACTTGGGATTAGCATATCAGAGACTTTTAAGGAAACAGGAGAAAGCGTTGCTGACATGAAGCCATTGAATTTGAAACAGTCAAGGAAAAGGAAGAATTCTCGTGATACTGTTGCTAAGACACAGTCAAGGAAAAAGGGTAAATTGAATGCTCCTGCCACAGCTTCTGGTCTGACTGAGGTAGATGTGCAGACAGGAGAAGAGCCAACTCAGCCAAGAGATGGGGGTGGTTTGAGAAGTAGCAAAGGCAGAGGCAAAGGTGTGGGAGTTCAAAGAGGAAGGAGGAAGAGAAGTCTTGGTTTTGATTCACGTAAAACTACATCTAGTGATAGTGACAGTGATGACCATGAGTCCGAAGTGCATGGTAGAAACTCAAGAGGGACAGAAGAGGTGCGAAGGTCTATGCGTTCTCGGAAGATTGTCAACTATTCCATGGACAACGTTGAAATTGAAGATGCTGATGCCTCAATTGATCTGAGCAACAAGACAGACTTGAACGAAGAGCCGATAGATGAAATATTTTCTGGGATGCATGGTGTTTGTGGCAATGCTGACTCTGGTTTCAGCGGACACAAGGAAAACACAATAAATCTTTCTCCAAAGAAGGATTTGTCTAGAAGCTATCTGGAATCAAGTGGGGGTTTCTGTACTGATGGAGAAAAAACTAATGCAGGAGCGAACAATTTTGATAGCTCTCGTGATGCCGACTACTGTAAAGTGGGCGGTGGATTTTGCCTCGATGAGGATGAGACAGGTAGCAAACATAATGAAATTCACGACGACAACTACCTAAGAGAGGGAGGTGGATTTTGCCTAGATGATGATGAGACAGGTGGCAAATGTAATGAAATTAATGACAACTCGGCAACTATGGTAGAGGATAGTGCAGAGCTCACTCATGGTTCTTCTGGTTTTGTGGATGAGGCTGAATGTGATAAAAATATTACTTGTCAATCAAGTTCAGCCGATAAAGCATCTGGAATTGAACTGCAAGATAGAGGAACAACTAAACACAAGATTGAGATGAATCATGACTGTAATTATGATCAGTCTGAGTCTGACACTGGGGTTTTCATGTCAGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGTCATGTCGGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGCGATGCCTTTTCTAAGAAAGAAAAGGAGGAAGAGCTGA 4644 0.4169 MQLDILSQLKGKKIEGLLKDSNNQKQCEVNDNGEGILSRENDTVGCSSSSDGMIAEKHNRDKIDEMLAASILAEENEKLVNKASTSGGAFISEEEEYINEEDEEMILPAMHGNVDPAVLASLPPSMQLDLLGQMRERLIAENRQTYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKAAAGGAVGGVRTSRIASEANREYIFSTSFTGDKQELTSTKLEKNKDAHQKTLGNHFSQAFVNNSGPANDSCTTSGLVCSEGGSPSDENIQTYVDERGQFRVSRLRAMGMRMTRDIQRNLDLMKEIEMERTVANKVENNNSILSGKKSVASKSFNNLLVGGPDRSDADLVGDNSRNEHPASAGDASLEISFMDDGDNKGLDDDDLFTSLVAGNSVVFSSADKTSMKEQVSDSSSDCDWEEGIVEGKSDVNEEIKQSVVKDNYNDESDVEWEDGVCDGAKTTTCAAEAHRATSRGCLEEEADLQEAIRRSLEVMGDHKLNCTSSSFEHSNADRDKSDYELNQDDNLVDSGVKGICGNFGVLNRDIRMGESTLQREDNTKHSEYKIIDNDNKLDNTVRSNIQVSQSPQGQSKPSVAFDCEKMVSFIKKPCSLEIGPHSEDLLYNANESRRNVIHNVAEQLVGTLNEHGNVSTNGDKSPVADSLGASEEEIKNCSNEAEPFGNYSEMPEPVAPFVDSSLEGLTEDRDTEPELPRDDNCGSIDKRKSNVGIDAMEPPGFFSAENLETHSELPREDNHGSFGEIKNNLVKDAMEAPGHLFVDAVDRGLEEEIRILGQEYSNLEYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTIFGRFETKRGSTTRKKGSKVEENVTGTNCNVEETMVDQNVFHAQEQNDSSDDIQEIKQIFMNKHRNVSKNWHIPSSFPSETVISAYSCPQVDKSTDPFAWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGNHSSELTNESAENLLSKSGKNDTGIPAELGISISETFKETGESVADMKPLNLKQSRKRKNSRDTVAKTQSRKKGKLNAPATASGLTEVDVQTGEEPTQPRDGGGLRSSKGRGKGVGVQRGRRKRSLGFDSRKTTSSDSDSDDHESEVHGRNSRGTEEVRRSMRSRKIVNYSMDNVEIEDADASIDLSNKTDLNEEPIDEIFSGMHGVCGNADSGFSGHKENTINLSPKKDLSRSYLESSGGFCTDGEKTNAGANNFDSSRDADYCKVGGGFCLDEDETGSKHNEIHDDNYLREGGGFCLDDDETGGKCNEINDNSATMVEDSAELTHGSSGFVDEAECDKNITCQSSSADKASGIELQDRGTTKHKIEMNHDCNYDQSESDTGVFMSENAHGNTENATAAFRVMSENAHGNTENATAAFRAMPFLRKKRRKS 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1754 1547 MobiDBLite consensus disorder prediction 699 724 - -
Prci14g1754 1547 MobiDBLite consensus disorder prediction 1237 1276 - -
Prci14g1754 1547 FunFam DNA repair protein UVH3 891 948 - -
Prci14g1754 1547 Gene3D - 891 1007 - -
Prci14g1754 1547 SUPERFAMILY PIN domain-like 795 906 IPR029060 -
Prci14g1754 1547 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 891 1100 IPR036279 -
Prci14g1754 1547 Gene3D - 775 890 - -
Prci14g1754 1547 MobiDBLite consensus disorder prediction 1155 1276 - -
Prci14g1754 1547 CDD H3TH_XPG 894 1038 - -
Prci14g1754 1547 SMART xpgineu 822 891 IPR006086 GO:0004518
Prci14g1754 1547 Coils Coil 785 812 - -
Prci14g1754 1547 CDD PIN_XPG_RAD2 808 892 - -
Prci14g1754 1547 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 6 1283 - -
Prci14g1754 1547 FunFam DNA repair protein UVH3 772 890 - -
Prci14g1754 1547 ProSitePatterns XPG protein signature 2. 825 839 IPR019974 GO:0016788
Prci14g1754 1547 SMART HhH_4 893 926 IPR008918 GO:0003677|GO:0003824
Prci14g1754 1547 MobiDBLite consensus disorder prediction 699 717 - -
Prci14g1754 1547 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 842 862 IPR006084 -
Prci14g1754 1547 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 821 838 IPR006084 -
Prci14g1754 1547 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 896 911 IPR006084 -
Prci14g1754 1547 MobiDBLite consensus disorder prediction 1166 1185 - -
Prci14g1754 1547 MobiDBLite consensus disorder prediction 339 363 - -
Prci14g1754 1547 Pfam XPG I-region 825 906 IPR006086 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1754 Prci-Chr14 24977590 24987937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1754 816 923 Core DNA Replication Machinery Family AT5G26680 36.036 2.47e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1754 K10846 - gmx:100820295 1398.65