Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1753 ATGGGAGTGAAGGGGCTCTGGGAACTTCTTGCCCCCGTCGGTCGTCGGGTCTCCGTCGAGACCCTTGCCGGGAAGAAGCTCGCCATTGATGCGAGCATATGGATGGTTCAGTTTATGAAGGCGATGCGGGATGAGAAGGGAGAAATGGTTCACAATGCTCATTTGCTCGGATTCTTTCGCCGAATTTGCAAGCTCTTGTTCCTCCGGACTAAGCCTGTTTTTGTCTTTGATGGCGGTACGCCTGTTCTCAAGCGACGGACTGTGATTGCGCGTCGGAGACAGCGGGAAAACGCTCAGGCCAAAGTTCGAAAGACTGCAGAGAAATTGCTTCTCAATCATTTAAAGGCATTGAAACTGAAAGAACTTTCAGACAATGTTAAGAAACAGAGGCTGAAGCAGAACAGCAAGGGCCAGAAGAAATCAGCTCAGATGGATTTGCTTGGCCGTGATTTAGGAAGAAACAATCAAAAGGAGCAAGATAAAATATCTGGAGCTGAGGTGGACAAGAATCTGTCCCAGACTACTGCATCAACAAGCTGTAATCAGGAGGATCTTGATGCAATGTTGGCAGCGTCCATTGTTGCAGAGGAAGATGGATTATTACACGGAAAAGCAGCATCTGGTCTAGCTGGTCTCTCTGAAGAGGAAGGTGATACAGATCCAGAAATAATAGTGCCAGCGTTAGGTGCTGAAGTTGATCTATCTGTGTTAGCTGCTTTACCACAGTCAATGCAACTTGATATTCTCTCTCAGCTTAAAGGGAAAAAAATAGAAGGACTACTGAAGGATTCTAACAACCAGAAACAATGTGAAGTGAATGACAATGGTGAGGGGATTCTGTCTCGTGAAAATGACACAGTAGGATGTAGCTCAAGTAGTGATGGTATGATAGCAGAGAAACACAATCGAGACAAAATAGATGAAATGTTGGCTGCATCTATTTTGGCTGAGGAAAATGAAAAGTTAGTAAACAAAGCATCAACGTCTGGTGGGGCTTTCATCTCTGAGGAAGAGGAGTACATTAATGAGGAAGATGAAGAGATGATCTTGCCAGCAATGCATGGTAATGTCGATCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTCGACCTTCTTGGTCAGATGAGAGAGCGACTAATTGCAGAGAACAGACAGACGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCGGAACTGCAAATACAGGCTTATCTTAAAACTGTTGCTTTTCGTCGGGAGATAAATGAAGTGCAGAAAGCTGCCGCAGGGGGAGCAGTTGGTGGTGTACGGACTTCTCGTATTGCATCTGAAGCCAACAGAGAGTACATATTTTCGACATCTTTTACCGGTGATAAGCAAGAACTTACTTCTACCAAATTAGAGAAAAATAAGGATGCACATCAGAAGACACTAGGAAACCATTTTTCTCAGGCTTTTGTTAATAACAGTGGTCCTGCCAATGATTCTTGTACCACAAGTGGATTAGTTTGCAGTGAAGGTGGAAGTCCATCTGATGAGAATATCCAAACGTATGTGGATGAGAGGGGCCAATTTCGTGTTAGTAGACTTAGAGCTATGGGGATGCGTATGACCCGTGACATACAAAGAAATTTGGATCTGATGAAGGAGATTGAGATGGAAAGAACAGTTGCAAATAAGGTAGAAAATAATAATTCAATTCTTAGTGGAAAGAAAAGTGTTGCATCAAAAAGTTTTAACAACCTGCTTGTTGGTGGCCCGGACAGGTCAGATGCTGACTTGGTTGGTGATAATTCTAGAAATGAACACCCTGCATCAGCAGGGGATGCTTCTTTGGAAATATCCTTCATGGATGATGGTGATAACAAGGGCCTTGATGATGATGATTTATTTACTAGTTTAGTAGCAGGAAATTCAGTAGTATTTTCCTCTGCTGACAAGACCTCAATGAAAGAACAAGTTTCTGATTCTAGTTCTGATTGTGACTGGGAAGAAGGAATTGTTGAAGGTAAAAGTGATGTGAATGAGGAAATAAAACAATCTGTTGTAAAAGATAATTATAATGACGAATCTGATGTAGAATGGGAGGATGGAGTTTGTGATGGTGCTAAGACAACGACGTGTGCAGCTGAGGCACACAGAGCAACATCTCGAGGTTGCTTGGAGGAGGAGGCTGATTTACAGGAGGCAATACGGAGAAGTCTTGAGGTCATGGGGGACCACAAACTTAATTGCACATCATCCAGTTTTGAACATTCAAATGCCGATAGGGACAAATCAGATTATGAATTAAACCAAGATGATAATTTGGTTGATTCTGGAGTGAAGGGTATTTGTGGCAATTTTGGTGTGCTGAATAGAGACATCAGAATGGGTGAGTCCACTTTGCAACGGGAAGATAACACTAAACACAGTGAATATAAAATTATTGACAATGACAATAAGCTGGATAACACAGTGAGAAGCAACATACAAGTTTCCCAGTCTCCTCAGGGACAGTCAAAGCCATCTGTGGCATTTGATTGCGAGAAGATGGTGTCATTTATTAAGAAGCCTTGTTCATTGGAGATAGGACCACATTCTGAAGATTTACTGTACAATGCAAATGAAAGCAGGAGAAATGTGATTCACAATGTTGCTGAGCAACTCGTGGGTACCTTAAATGAACATGGCAATGTGTCTACCAATGGCGACAAATCTCCTGTAGCTGACTCCCTTGGTGCTTCAGAAGAGGAGATAAAGAATTGTAGCAATGAAGCTGAACCTTTTGGTAATTATTCTGAGATGCCTGAGCCTGTTGCTCCTTTTGTGGATTCCTCCTTGGAAGGATTAACAGAAGACCGTGACACTGAGCCAGAGTTGCCTAGAGATGACAACTGTGGAAGCATTGATAAAAGGAAGAGTAATGTCGGTATAGATGCAATGGAGCCCCCAGGTTTTTTCTCTGCTGAAAACCTTGAAACTCACTCGGAGCTGCCTAGGGAGGATAACCATGGAAGCTTTGGAGAAATCAAGAACAACCTTGTCAAAGATGCAATGGAAGCCCCAGGTCACTTGTTTGTAGATGCGGTTGATCGTGGTTTGGAGGAAGAAATCCGAATTCTTGGTCAAGAATATTCCAACCTAGAATATGAGCAGAGGAAGCTTGAACGCAATGCAGAATCTGTCAACAGTGAATTATTCACTGAATGTCAGGAACTATTGCAAATGTTTGGCTTGCCATATATTATTGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAGCTTGCAAAACTGGTGGATGGTGTTGTGACTGATGACTCTGATGTCTTTTTATTCGGGGCACGTAGTGTCTACAAGAATATATTTGATGACCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAGCTTGGATTGACCAGAGAAAAATTAATCCGCATGGCTTTGCTTCTGGGAAGTGATTATACTGAGGGTGTAAGTGGAATTGGAATTGTAAATGCTATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTTCTGAAATTCCGGCAGTGGGTTGAGTCACCTGATCCCACCATCTTTGGAAGGTTTGAAACAAAAAGAGGATCCACCACCCGAAAGAAAGGGTCAAAAGTTGAAGAAAACGTTACTGGCACAAATTGCAATGTAGAAGAGACTATGGTGGATCAAAATGTTTTCCATGCTCAGGAACAAAATGACTCATCAGATGACATCCAAGAAATCAAGCAGATTTTTATGAATAAACATAGAAATGTGAGCAAGAATTGGCACATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTATTCTTGTCCTCAAGTGGACAAGTCAACGGATCCATTTGCTTGGGGAAAGCCAGATCATCTTGTTCTTCGCAAATTGTGCTGGGAGAAGTTTGGCTGGACTAGTCAGAAAGCAGATGAGTTGCTTTTACCTGTTTTAAAAGAATATAACAAGCATGAGACTCAACTGCGATTGGAAGCATTTTATAGTTTCAATGAAAGATTCGCAAAAATTCGCAGTAAGCGAATTAAGAAAGCAGTGAAAGGAATCACTGGAAATCACTCTTCAGAGTTGACAAATGAATCTGCGGAGAACTTGCTGTCAAAGAGTGGGAAGAATGATACAGGAATTCCTGCTGAACTTGGGATTAGCATATCAGAGACTTTTAAGGAAACAGGAGAAAGCGTTGCTGACATGAAGCCATTGAATTTGAAACAGTCAAGGAAAAGGAAGAATTCTCGTGATACTGTTGCTAAGACACAGTCAAGGAAAAAGGGTAAATTGAATGCTCCTGCCACAGCTTCTGGTCTGACTGAGGTAGATGTGCAGACAGGAGAAGAGCCAACTCAGCCAAGAGATGGGGGTGGTTTGAGAAGTAGCAAAGGCAGAGGCAAAGGTGTGGGAGTTCAAAGAGGAAGGAGGAAGAGAAGTCTTGGTTTTGATTCACGTAAAACTACATCTAGTGATAGTGACAGTGATGACCATGAGTCCGAAGTGCATGGTAGAAACTCAAGAGGGACAGAAGAGGTGCGAAGGTCTATGCGTTCTCGGAAGATTGTCAACTATTCCATGGACAACGTTGAAATTGAAGATGCTGATGCCTCAATTGATCTGAGCAACAAGACAGACTTGAACGAAGAGCCGATAGATGAAATATTTTCTGGGATGCATGGTGTTTGTGGCAATGCTGACTCTGGTTTCAGCGGACACAAGGAAAACACAATAAATCTTTCTCCAAAGAAGGATTTGTCTAGAAGCTATCTGGAATCAAGTGGGGGTTTCTGTACTGATGGAGAAAAAACTAATGCAGGAGCGAACAATTTTGATAGCTCTCGTGATGCCGACTACTGTAAAGTGGGCGGTGGATTTTGCCTCGATGAGGATGAGACAGGTAGCAAACATAATGAAATTCACGACGACAACTACCTAAGAGAGGGAGGTGGATTTTGCCTAGATGATGATGAGACAGGTGGCAAATGTAATGAAATTAATGACAACTCGGCAACTATGGTAGAGGATAGTGCAGAGCTCACTCATGGTTCTTCTGGTTTTGTGGATGAGGCTGAATGTGATAAAAATATTACTTGTCAATCAAGTTCAGCCGATAAAGCATCTGGAATTGAACTGCAAGATAGAGGAACAACTAAACACAAGATTGAGATGAATCATGACTGTAATTATGATCAGTCTGAGTCTGACACTGGGGTTTTCATGTCAGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGTCATGTCGGAGAATGCTCATGGCAATACCGAGAACGCCACAGCAGCATTCAGAGCGATGCCTTTTCTAAGAAAGAAAAGGAGGAAGAGCTGA 5373 0.4251 MGVKGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVHNAHLLGFFRRICKLLFLRTKPVFVFDGGTPVLKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALKLKELSDNVKKQRLKQNSKGQKKSAQMDLLGRDLGRNNQKEQDKISGAEVDKNLSQTTASTSCNQEDLDAMLAASIVAEEDGLLHGKAASGLAGLSEEEGDTDPEIIVPALGAEVDLSVLAALPQSMQLDILSQLKGKKIEGLLKDSNNQKQCEVNDNGEGILSRENDTVGCSSSSDGMIAEKHNRDKIDEMLAASILAEENEKLVNKASTSGGAFISEEEEYINEEDEEMILPAMHGNVDPAVLASLPPSMQLDLLGQMRERLIAENRQTYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKAAAGGAVGGVRTSRIASEANREYIFSTSFTGDKQELTSTKLEKNKDAHQKTLGNHFSQAFVNNSGPANDSCTTSGLVCSEGGSPSDENIQTYVDERGQFRVSRLRAMGMRMTRDIQRNLDLMKEIEMERTVANKVENNNSILSGKKSVASKSFNNLLVGGPDRSDADLVGDNSRNEHPASAGDASLEISFMDDGDNKGLDDDDLFTSLVAGNSVVFSSADKTSMKEQVSDSSSDCDWEEGIVEGKSDVNEEIKQSVVKDNYNDESDVEWEDGVCDGAKTTTCAAEAHRATSRGCLEEEADLQEAIRRSLEVMGDHKLNCTSSSFEHSNADRDKSDYELNQDDNLVDSGVKGICGNFGVLNRDIRMGESTLQREDNTKHSEYKIIDNDNKLDNTVRSNIQVSQSPQGQSKPSVAFDCEKMVSFIKKPCSLEIGPHSEDLLYNANESRRNVIHNVAEQLVGTLNEHGNVSTNGDKSPVADSLGASEEEIKNCSNEAEPFGNYSEMPEPVAPFVDSSLEGLTEDRDTEPELPRDDNCGSIDKRKSNVGIDAMEPPGFFSAENLETHSELPREDNHGSFGEIKNNLVKDAMEAPGHLFVDAVDRGLEEEIRILGQEYSNLEYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTIFGRFETKRGSTTRKKGSKVEENVTGTNCNVEETMVDQNVFHAQEQNDSSDDIQEIKQIFMNKHRNVSKNWHIPSSFPSETVISAYSCPQVDKSTDPFAWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGNHSSELTNESAENLLSKSGKNDTGIPAELGISISETFKETGESVADMKPLNLKQSRKRKNSRDTVAKTQSRKKGKLNAPATASGLTEVDVQTGEEPTQPRDGGGLRSSKGRGKGVGVQRGRRKRSLGFDSRKTTSSDSDSDDHESEVHGRNSRGTEEVRRSMRSRKIVNYSMDNVEIEDADASIDLSNKTDLNEEPIDEIFSGMHGVCGNADSGFSGHKENTINLSPKKDLSRSYLESSGGFCTDGEKTNAGANNFDSSRDADYCKVGGGFCLDEDETGSKHNEIHDDNYLREGGGFCLDDDETGGKCNEINDNSATMVEDSAELTHGSSGFVDEAECDKNITCQSSSADKASGIELQDRGTTKHKIEMNHDCNYDQSESDTGVFMSENAHGNTENATAAFRVMSENAHGNTENATAAFRAMPFLRKKRRKS 1790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1753 1790 MobiDBLite consensus disorder prediction 1409 1428 - -
Prci14g1753 1790 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Prci14g1753 1790 SMART HhH_4 1136 1169 IPR008918 GO:0003677|GO:0003824
Prci14g1753 1790 FunFam DNA repair protein UVH3 1 147 - -
Prci14g1753 1790 Gene3D - 1018 1133 - -
Prci14g1753 1790 FunFam DNA repair protein UVH3 1015 1133 - -
Prci14g1753 1790 SMART xpgn3 1 98 IPR006085 GO:0004518
Prci14g1753 1790 Pfam Ubiquitin binding region 356 381 IPR025527 -
Prci14g1753 1790 Pfam Ubiquitin binding region 227 251 IPR025527 -
Prci14g1753 1790 SMART xpgineu 1065 1134 IPR006086 GO:0004518
Prci14g1753 1790 Gene3D - 1134 1250 - -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 942 967 - -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 1480 1519 - -
Prci14g1753 1790 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1134 1343 IPR036279 -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 127 178 - -
Prci14g1753 1790 CDD H3TH_XPG 1137 1281 - -
Prci14g1753 1790 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 263 - -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 1398 1519 - -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 582 606 - -
Prci14g1753 1790 SUPERFAMILY PIN domain-like 2 1149 IPR029060 -
Prci14g1753 1790 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Prci14g1753 1790 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Prci14g1753 1790 CDD PIN_XPG_RAD2 2 92 - -
Prci14g1753 1790 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Prci14g1753 1790 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Prci14g1753 1790 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Prci14g1753 1790 FunFam DNA repair protein UVH3 1134 1191 - -
Prci14g1753 1790 ProSitePatterns XPG protein signature 2. 1068 1082 IPR019974 GO:0016788
Prci14g1753 1790 Gene3D - 1 147 - -
Prci14g1753 1790 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Prci14g1753 1790 Pfam XPG I-region 1068 1149 IPR006086 GO:0004518
Prci14g1753 1790 MobiDBLite consensus disorder prediction 151 165 - -
Prci14g1753 1790 CDD PIN_XPG_RAD2 1051 1135 - -
Prci14g1753 1790 MobiDBLite consensus disorder prediction 942 960 - -
Prci14g1753 1790 Coils Coil 1028 1055 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1753 Prci-Chr14 24976286 24987937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1753 1059 1166 Core DNA Replication Machinery Family AT5G26680 36.036 3.06e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1753 K10846 - gmx:100820295 1719.52