Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1747 ATGGTCGATCCGACTGGCAAAGGATCGGAGGCCGAGGACACCAATAACAGAAGCCCTAACGCTGATTCATCGGAAGGAAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACTTCAAAAACCCCTCTTTGGAGAGGTGGTCCGGCCGGGCCCAAGTCTCTGTGCAACGCGTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCCATTCTGGGCATGAACAAGGGAAATACGGATGACAAAAAGGGCAAAAGAAGCAACAACAGTTCCAAGATTGGGGATAGTTTGAAGCAGAGATTAATGGCTCTGGGGAGGGAGGTTTTGATGCAGAGATCGTCGGTGGAGAGGCAGAGGAAGAAACTGGGGGAGGAAGAACAAGCGGCCGTGCTGTTGATGGCCCTCTCGTACGGCTATGTTTATGCTTAA 435 0.5241 MVDPTGKGSEAEDTNNRSPNADSSEGSPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMNKGNTDDKKGKRSNNSSKIGDSLKQRLMALGREVLMQRSSVERQRKKLGEEEQAAVLLMALSYGYVYA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1747 144 CDD ZnF_GATA 36 71 IPR000679 GO:0006355|GO:0043565
Prci14g1747 144 Gene3D - 31 96 IPR013088 GO:0006355|GO:0008270
Prci14g1747 144 MobiDBLite consensus disorder prediction 1 58 - -
Prci14g1747 144 MobiDBLite consensus disorder prediction 75 91 - -
Prci14g1747 144 PANTHER OS01G0976800 PROTEIN 7 143 - -
Prci14g1747 144 ProSiteProfiles GATA-type zinc finger domain profile. 31 67 IPR000679 GO:0006355|GO:0043565
Prci14g1747 144 MobiDBLite consensus disorder prediction 70 98 - -
Prci14g1747 144 Pfam GATA zinc finger 37 71 IPR000679 GO:0006355|GO:0043565
Prci14g1747 144 MobiDBLite consensus disorder prediction 9 40 - -
Prci14g1747 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 72 - -
Prci14g1747 144 ProSitePatterns GATA-type zinc finger domain. 37 62 IPR000679 GO:0006355|GO:0043565
Prci14g1747 144 SMART GATA_3 31 84 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1747 Prci-Chr14 24885928 24887111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1747 1 144 C2C2-Gata Transcription Factor Family AT3G06740 60.131 9.79e-55 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci14g1747 GATA 1.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1747 - - qsa:O6P43_021814 230.335