Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1738 ATGATGGCAAACAACTTAACGGGGCAACTATTGGGCTCAGAGATACATGGATTCCATACATTGCAGGAGTTGGATGTTGGAATTATTATGGAGGAAGCAAGATGCAGATGGCTTCGTCCGAATGAGATTCATGCCATACTCTGCAATCACAAAAATTTTACCATCCATGTCAAGCCAGTGACCTTGCCCAAAAGTGGTACTCTTATATTATTTGACAGGAAGAAGCTTAGGAACTTTCGTAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGTGAAGAAAACCCGAATTTTGTTCGCAGATGTTATTGGTTGCTTGATAAGAATCTGGAGCATATCGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCAGTCACACCTGTATATTCAAATGCTAGTTCTCCGTCTGATCCAACAACACCATGGGTATTATCAGAAGAATTAGATTCTGGGATCAACAAGGCATATGCTGGCGATCTGAATGACAATTTAACCGTCAAAAGTCATGAACTGAGGCTTCATGAAATTAATACACTTGAATGGGATGACCTAGTGGTTACAAATGATCTTAATGCCTCTACCACTTCCACTCGTCCTGGAGGAAAGGCTCCATGTTTTCATCAAGAAAAACAAATTTTACTGAATGGTAATTCGAGCACGGTAGTTGACAAACAATCTGCAGACATTCCTTCTTTTGATATTCCAAACAATTCGATTAATGGGATCAATAGTGCTCAATACAATTTTCATGAAAGTTCGAATCTTCAGACATTCAATAGTCAATCAAATTCAAATGTACAGAGTGAACATTCTATCACCATCAGTGGTGGCGATTTAGTGGATAGTCTTGTCAATGATACTCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAGCAATATGATATCTGATTCACCATGTTCTATTGATGACTCTGGTCTTGAATCCTCGGTTTCATCTGTTCATGATTCATACTCTTCAGTATTGGATAATCATCAACCTTCTCTGCCAGAACAAGTGTTTAATATTACTGATGTGTCACCTGGCCGGGCATGCTCCACTGAGAATACAAAGGTCCTAATAACTGGAATTTTTCATGATGACTATCTGCACCTTGCGAAGTCCAATATGTTTTGTATCTGTGGGGACGTACCTGTTCCTACAGAATTTGTTCAACTCGGTGTCTACCGATGCTGGGTACCACCACATTCCCCTGGTTTTGTGAATCTCTATATGAGTTCTGATGGCCATAAGCCCATAAGTCAAGTTGTTAATTTTGAGTATCGTACTACTGTTGTGCAAGACCCTGCTGCTTCTACAGAAGAGAGGTACAACCGGGAGGAGTTTCGACTTCAGATGAGGCTTGCGTATTTGCTCTTTTCTACACAAAAGAGTCTTGATATTACCTCTAGCAAAGTATTGCCTGATGCACTGAAGGAGGCTAAGAAATTTGTCTCCAAGACATCGTATATTTCCAAAAGTTGGCAATACTTGATTGAGTCAACTGAGGACCATGAAACTCCATTTCCACAAACAAAAGATGCCTTGTTTGAAATTGCATTAAAGACTAAACTAAAGGAGTGGCTGTTGGAAAGAATTATTTTAGGTTGTCAGACTACTGAACTTGATGCCCGAGGTCAAGGTGTAATTCATTTATGCTCGATTTTGGGATATAGATGGGCTGTTTCATTATTCTCATTGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCTGCTTATTATGGAAGGGAGAGAATGGTTGCTTCTCTATTGTCTGCAGGGGCAAGGCCAAATTTGGTTACAGATCCTACTCCTCAACATCCTGGTGGATTTACTGCTGCTTGTCTGGCTCAGATGAAAGGTTATGATGGCTTAGCAGCTTATCTTTCGGAAAAGTCTCTGGTTGAGCACCTCAAGGAAATGAGCATAGCAGGAAACGCAAGTGGCTCACTGGAAACTACTCGCACAAGTGATCCAGTAAAATCTGAGAAGTTCAATGAGGATCACCTATATATGAGGGATACATTAGCAGCTTACCGGACAGCTGCTGAGGCTGCAGCGCGCATACAAGCTGCATTTAGAGAGCAGTCACTAAAATTACGATCTCATGCAGTTGAAATTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATCCAGCATGCTTTTCGAAACTTTGAGACGAGGAAGTCTATGGCAGCTGCTGCTCGCATTCAGCATACCTTCCGTACATGGAAGATGCGTAGAGAATTTCTCAATATGCGTCGACAGGCAATCAGAATTCAGGCTGCTTTCCGGGCCTTCAAAGAGCGGAAGAACTACCGCAAAATCATTTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTGCGGTGGCGTTTAAAAAGACGGGGCTTCCGTGGCCTTCATGTCAATCCTGTCCAAGAAGTGGAAGGTCAGCAGGAGGAAACAGAGTTTGTTACTGAGGAGGACTTTTTCCGGACTGGCAGGAAACAAGCTGAAGAACGTGTTGAGAGAGCTGTTGTGCGTGTTCAAGCCATGTTCCGGTCTAAGAAAGCACAAGTAGATTACAGGAGGATGAAACTAGCCCATAATCAAGCAACGATGGAACTAGAACATGAAGAGCTCCTCAATTCTGAGGTTGATATGGGAGTGAAGACATAG 2784 0.421 MMANNLTGQLLGSEIHGFHTLQELDVGIIMEEARCRWLRPNEIHAILCNHKNFTIHVKPVTLPKSGTLILFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENPNFVRRCYWLLDKNLEHIVLVHYRETQELQGSPVTPVYSNASSPSDPTTPWVLSEELDSGINKAYAGDLNDNLTVKSHELRLHEINTLEWDDLVVTNDLNASTTSTRPGGKAPCFHQEKQILLNGNSSTVVDKQSADIPSFDIPNNSINGINSAQYNFHESSNLQTFNSQSNSNVQSEHSITISGGDLVDSLVNDTLQSQDSFGKWISNMISDSPCSIDDSGLESSVSSVHDSYSSVLDNHQPSLPEQVFNITDVSPGRACSTENTKVLITGIFHDDYLHLAKSNMFCICGDVPVPTEFVQLGVYRCWVPPHSPGFVNLYMSSDGHKPISQVVNFEYRTTVVQDPAASTEERYNREEFRLQMRLAYLLFSTQKSLDITSSKVLPDALKEAKKFVSKTSYISKSWQYLIESTEDHETPFPQTKDALFEIALKTKLKEWLLERIILGCQTTELDARGQGVIHLCSILGYRWAVSLFSLSGFSLNFRDKFGWTALHWAAYYGRERMVASLLSAGARPNLVTDPTPQHPGGFTAACLAQMKGYDGLAAYLSEKSLVEHLKEMSIAGNASGSLETTRTSDPVKSEKFNEDHLYMRDTLAAYRTAAEAAARIQAAFREQSLKLRSHAVEIFSPEAEARQIVAAMKIQHAFRNFETRKSMAAAARIQHTFRTWKMRREFLNMRRQAIRIQAAFRAFKERKNYRKIIWSVGVVEKAILRWRLKRRGFRGLHVNPVQEVEGQQEETEFVTEEDFFRTGRKQAEERVERAVVRVQAMFRSKKAQVDYRRMKLAHNQATMELEHEELLNSEVDMGVKT 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1738 927 ProSiteProfiles IQ motif profile. 878 906 IPR000048 GO:0005515
Prci14g1738 927 SMART ANK_2a 607 636 IPR002110 GO:0005515
Prci14g1738 927 SUPERFAMILY Ankyrin repeat 554 669 IPR036770 -
Prci14g1738 927 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 906 - -
Prci14g1738 927 ProSiteProfiles IQ motif profile. 772 798 IPR000048 GO:0005515
Prci14g1738 927 SMART iq_5 876 898 IPR000048 GO:0005515
Prci14g1738 927 SMART iq_5 752 774 IPR000048 GO:0005515
Prci14g1738 927 SMART iq_5 775 793 IPR000048 GO:0005515
Prci14g1738 927 SMART iq_5 794 816 IPR000048 GO:0005515
Prci14g1738 927 Gene3D - 771 819 - -
Prci14g1738 927 Pfam CG-1 domain 33 145 IPR005559 GO:0003677
Prci14g1738 927 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
Prci14g1738 927 SMART CG_1_2 29 147 IPR005559 GO:0003677
Prci14g1738 927 SUPERFAMILY E set domains 371 458 IPR014756 -
Prci14g1738 927 Pfam Ankyrin repeats (3 copies) 561 636 IPR002110 GO:0005515
Prci14g1738 927 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
Prci14g1738 927 Gene3D Immunoglobulins 366 461 IPR013783 -
Prci14g1738 927 ProSiteProfiles IQ motif profile. 753 782 IPR000048 GO:0005515
Prci14g1738 927 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Prci14g1738 927 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Prci14g1738 927 Gene3D - 527 729 IPR036770 -
Prci14g1738 927 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1738 Prci-Chr14 24724137 24735777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1738 29 910 CAMTA Transcription Factor Family AT3G16940 53.543 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci14g1738 Ank_2 4.1e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1738 K21596 - gmx:100793970 1269.99