Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1737 ATGATGGCAAACAACTTAACGGGGCAACTATTGGGCTCAGAGATACATGGATTCCATACATTGCAGGGTATGTACGCATTTGAACGTTTCCATCCCGTTCTCTCTCCAGCTACTATCTTTCTTCATGGTGGAGAGTTGGATGTTGGAATTATTATGGAGGAAGCAAGATGCAGATGGCTTCGTCCGAATGAGATTCATGCCATACTCTGCAATCACAAAAATTTTACCATCCATGTCAAGCCAGTGACCTTGCCCAAAAGTGGTACTCTTATATTATTTGACAGGAAGAAGCTTAGGAACTTTCGTAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGTGAAGAAAACCCGAATTTTGTTCGCAGATGTTATTGGTTGCTTGATAAGAATCTGGAGCATATCGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCAGTCACACCTGTATATTCAAATGCTAGTTCTCCGTCTGATCCAACAACACCATGGGTATTATCAGAAGAATTAGATTCTGGGATCAACAAGGCATATGCTGGCGATCTGAATGACAATTTAACCGTCAAAAGTCATGAACTGAGGCTTCATGAAATTAATACACTTGAATGGGATGACCTAGTGGTTACAAATGATCTTAATGCCTCTACCACTTCCACTCGTCCTGGAGGAAAGGCTCCATGTTTTCATCAAGAAAAACAAATTTTACTGAATGGTAATTCGAGCACGGTAGTTGACAAACAATCTGCAGACATTCCTTCTTTTGATATTCCAAACAATTCGATTAATGGGATCAATAGTGCTCAATACAATTTTCATGAAAGTTCGAATCTTCAGACATTCAATAGTCAATCAAATTCAAATGTACAGAGTGAACATTCTATCACCATCAGTGGTGGCGATTTAGTGGATAGTCTTGTCAATGATACTCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAGCAATATGATATCTGATTCACCATGTTCTATTGATGACTCTGGTCTTGAATCCTCGGTTTCATCTGTTCATGATTCATACTCTTCAGTATTGGATAATCATCAACCTTCTCTGCCAGAACAAGTGTTTAATATTACTGATGTGTCACCTGGCCGGGCATGCTCCACTGAGAATACAAAGGTCCTAATAACTGGAATTTTTCATGATGACTATCTGCACCTTGCGAAGTCCAATATGTTTTGTATCTGTGGGGACGTACCTGTTCCTACAGAATTTGTTCAACTCGGTGTCTACCGATGCTGGGTACCACCACATTCCCCTGGTTTTGTGAATCTCTATATGAGTTCTGATGGCCATAAGCCCATAAGTCAAGTTGTTAATTTTGAGTATCGTACTACTGTTGTGCAAGACCCTGCTGCTTCTACAGAAGAGAGGTACAACCGGGAGGAGTTTCGACTTCAGATGAGGCTTGCGTATTTGCTCTTTTCTACACAAAAGAGTCTTGATATTACCTCTAGCAAAGTATTGCCTGATGCACTGAAGGAGGCTAAGAAATTTGTCTCCAAGACATCGTATATTTCCAAAAGTTGGCAATACTTGATTGAGTCAACTGAGGACCATGAAACTCCATTTCCACAAACAAAAGATGCCTTGTTTGAAATTGCATTAAAGACTAAACTAAAGGAGTGGCTGTTGGAAAGAATTATTTTAGGTTGTCAGACTACTGAACTTGATGCCCGAGGTCAAGGTGTAATTCATTTATGCTCGATTTTGGGATATAGATGGGCTGTTTCATTATTCTCATTGTCTGGTTTTTCATTGAATTTCCGTGATAAATTTGGATGGACAGCCCTGCACTGGGCTGCTTATTATGGAAGGGAGAGAATGGTTGCTTCTCTATTGTCTGCAGGGGCAAGGCCAAATTTGGTTACAGATCCTACTCCTCAACATCCTGGTGGATTTACTGCTGCTTGTCTGGCTCAGATGAAAGGTTATGATGGCTTAGCAGCTTATCTTTCGGAAAAGTCTCTGGTTGAGCACCTCAAGGAAATGAGCATAGCAGGAAACGCAAGTGGCTCACTGGAAACTACTCGCACAAGTGATCCAGTAAAATCTGAGAAGTTCAATGAGGATCACCTATATATGAGGGATACATTAGCAGCTTACCGGACAGCTGCTGAGGCTGCAGCGCGCATACAAGCTGCATTTAGAGAGCAGTCACTAAAATTACGATCTCATGCAGTTGAAATTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATCCAGCATGCTTTTCGAAACTTTGAGACGAGGAAGTCTATGGCAGCTGCTGCTCGCATTCAGCATACCTTCCGTACATGGAAGATGCGTAGAGAATTTCTCAATATGCGTCGACAGGCAATCAGAATTCAGGCTGCTTTCCGGGCCTTCAAAGAGCGGAAGAACTACCGCAAAATCATTTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTGCGGTGGCGTTTAAAAAGACGGGGCTTCCGTGGCCTTCATGTCAATCCTGTCCAAGAAGTGGAAGGTCAGCAGGAGGAAACAGAGTTTGTTACTGAGGAGGACTTTTTCCGGACTGGCAGGAAACAAGCTGAAGAACGTGTTGAGAGAGCTGTTGTGCGTGTTCAAGCCATGTTCCGGTCTAAGAAAGCACAAGTAGATTACAGGAGGATGAAACTAGCCCATAATCAAGCAACGATGGAACTAGAACATGAAGAGCTCCTCAATTCTGAGGTTGATATGGGAGTGAAGACATAG 2850 0.4218 MMANNLTGQLLGSEIHGFHTLQGMYAFERFHPVLSPATIFLHGGELDVGIIMEEARCRWLRPNEIHAILCNHKNFTIHVKPVTLPKSGTLILFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENPNFVRRCYWLLDKNLEHIVLVHYRETQELQGSPVTPVYSNASSPSDPTTPWVLSEELDSGINKAYAGDLNDNLTVKSHELRLHEINTLEWDDLVVTNDLNASTTSTRPGGKAPCFHQEKQILLNGNSSTVVDKQSADIPSFDIPNNSINGINSAQYNFHESSNLQTFNSQSNSNVQSEHSITISGGDLVDSLVNDTLQSQDSFGKWISNMISDSPCSIDDSGLESSVSSVHDSYSSVLDNHQPSLPEQVFNITDVSPGRACSTENTKVLITGIFHDDYLHLAKSNMFCICGDVPVPTEFVQLGVYRCWVPPHSPGFVNLYMSSDGHKPISQVVNFEYRTTVVQDPAASTEERYNREEFRLQMRLAYLLFSTQKSLDITSSKVLPDALKEAKKFVSKTSYISKSWQYLIESTEDHETPFPQTKDALFEIALKTKLKEWLLERIILGCQTTELDARGQGVIHLCSILGYRWAVSLFSLSGFSLNFRDKFGWTALHWAAYYGRERMVASLLSAGARPNLVTDPTPQHPGGFTAACLAQMKGYDGLAAYLSEKSLVEHLKEMSIAGNASGSLETTRTSDPVKSEKFNEDHLYMRDTLAAYRTAAEAAARIQAAFREQSLKLRSHAVEIFSPEAEARQIVAAMKIQHAFRNFETRKSMAAAARIQHTFRTWKMRREFLNMRRQAIRIQAAFRAFKERKNYRKIIWSVGVVEKAILRWRLKRRGFRGLHVNPVQEVEGQQEETEFVTEEDFFRTGRKQAEERVERAVVRVQAMFRSKKAQVDYRRMKLAHNQATMELEHEELLNSEVDMGVKT 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1737 949 ProSiteProfiles Ankyrin repeat profile. 629 661 IPR002110 GO:0005515
Prci14g1737 949 Pfam IQ calmodulin-binding motif 819 838 IPR000048 GO:0005515
Prci14g1737 949 SUPERFAMILY E set domains 393 480 IPR014756 -
Prci14g1737 949 Pfam CG-1 domain 55 167 IPR005559 GO:0003677
Prci14g1737 949 Pfam Ankyrin repeats (3 copies) 579 658 IPR002110 GO:0005515
Prci14g1737 949 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 47 928 - -
Prci14g1737 949 ProSiteProfiles Ankyrin repeat region circular profile. 629 657 - -
Prci14g1737 949 ProSiteProfiles IQ motif profile. 794 820 IPR000048 GO:0005515
Prci14g1737 949 SMART iq_5 898 920 IPR000048 GO:0005515
Prci14g1737 949 SMART iq_5 774 796 IPR000048 GO:0005515
Prci14g1737 949 SMART iq_5 816 838 IPR000048 GO:0005515
Prci14g1737 949 SMART iq_5 797 815 IPR000048 GO:0005515
Prci14g1737 949 SUPERFAMILY Ankyrin repeat 576 691 IPR036770 -
Prci14g1737 949 ProSiteProfiles IQ motif profile. 900 928 IPR000048 GO:0005515
Prci14g1737 949 SMART ANK_2a 629 658 IPR002110 GO:0005515
Prci14g1737 949 ProSiteProfiles IQ motif profile. 775 804 IPR000048 GO:0005515
Prci14g1737 949 Gene3D Immunoglobulins 388 483 IPR013783 -
Prci14g1737 949 ProSiteProfiles IQ motif profile. 817 841 IPR000048 GO:0005515
Prci14g1737 949 SMART CG_1_2 51 169 IPR005559 GO:0003677
Prci14g1737 949 Gene3D - 549 751 IPR036770 -
Prci14g1737 949 ProSiteProfiles CG-1 DNA-binding domain profile. 48 174 IPR005559 GO:0003677
Prci14g1737 949 Gene3D - 793 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1737 Prci-Chr14 24724137 24735778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1737 51 932 CAMTA Transcription Factor Family AT3G16940 53.656 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci14g1737 CG-1 4.9e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1737 K21596 - gmx:100793970 1257.28