Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1736 ATGATTTCAGGTCGGTGTGCAGCTTGTAAGAATCAAAGAAGAAAGTGTCCTTCAGATTGCATTTTCTCCCCCTATTTTCCTCCCAATGATCCTGAAAGATTTGCTTGCGTTCATAGAATATACGGTAGCAGCAATGTTGGAAAAATGCTTCAGCAAATCCCAGTGCATGCGCGAGCACAAGCAGTGGATACGTTATATTTTGAGGCACGATGCAGGACAGAAGATCCTGTGTATGGCTGTGTTAAGCTTATTTCTCAGTTGCATCAGAACTTGCATGATACAGAAAGCGAACTAGCCAGAGTTCAAGCTATTATTGCCTTCCACAAGCTCCGAATCTCACAAGTTGAAGCTCATCAACCAAACTTGGATCCATCACAGAGCAGTATCGAGCAGTTTCAGTTCAATTATTCTACCCAGAATCCTTGGCTTATTAATTAG 438 0.4224 MISGRCAACKNQRRKCPSDCIFSPYFPPNDPERFACVHRIYGSSNVGKMLQQIPVHARAQAVDTLYFEARCRTEDPVYGCVKLISQLHQNLHDTESELARVQAIIAFHKLRISQVEAHQPNLDPSQSSIEQFQFNYSTQNPWLIN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1736 145 Coils Coil 84 104 - -
Prci14g1736 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 127 - -
Prci14g1736 145 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Prci14g1736 145 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1736 Prci-Chr14 24720939 24723054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1736 1 116 AS2 family AT3G26660 59.483 7.57e-51 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci14g1736 LOB 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1736 - - lang:109328513 187.578