Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1722 ATGGGTTCATTGTTACTGATGATCAGAAGCCCCAGCGAGAACGAAGAGCAAGGACGTGGAACTTTGATAGAAAAGTTCGAATTATATACACAGACCCAGATGCTACAGATTGTTCCAGCGAAGAAGAAGGTGAAACCCTGGCCATGGCTCCAAGCGATTTGTGAAGGAAATTCTTGTTCCGACCAAATCATGCGGCAGAGGAAACACCAAAAAGAGTCCCAGTTTTTCCGTCGCCGGCACCAGGCGGGGCCCGAGGATCGGAAATCGTCAGGCTTGCCGAGAGGAGTACGACGTCGTAAGTGGGGGACCTACGTGGCGGAGATCCGAGATCCGATTCGAAGGGTCCGAATGTGGCTCGGAACCTACAATACCGTCGAAGAAGCGCTTTGGCTTATGAGAATAAGAGGACGGAGTTCGAAATCTTGA 426 0.5094 MGSLLLMIRSPSENEEQGRGTLIEKFELYTQTQMLQIVPAKKKVKPWPWLQAICEGNSCSDQIMRQRKHQKESQFFRRRHQAGPEDRKSSGLPRGVRRRKWGTYVAEIRDPIRRVRMWLGTYNTVEEALWLMRIRGRSSKS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1722 141 MobiDBLite consensus disorder prediction 70 94 - -
Prci14g1722 141 ProSiteProfiles AP2/ERF domain profile. 92 128 IPR001471 GO:0003700|GO:0006355
Prci14g1722 141 Gene3D AP2/ERF domain 94 134 IPR036955 GO:0003700|GO:0006355
Prci14g1722 141 SMART rav1_2 94 140 IPR001471 GO:0003700|GO:0006355
Prci14g1722 141 MobiDBLite consensus disorder prediction 70 92 - -
Prci14g1722 141 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Prci14g1722 141 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Prci14g1722 141 Pfam AP2 domain 94 128 IPR001471 GO:0003700|GO:0006355
Prci14g1722 141 SUPERFAMILY DNA-binding domain 93 130 IPR016177 GO:0003677
Prci14g1722 141 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 73 128 - -
Prci14g1722 141 CDD AP2 94 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1722 Prci-Chr14 24469169 24469679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1722 78 140 AP2-EREBP Transcription Factor Family AT1G72360 50.000 2.76e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci14g1722 AP2 5.6e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1722 - - pcin:129292391 285.034