Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1716 ATGCTTACGTGCATAGCTCGTCCGAAGAAACTCGGGCATGAGTCACTGAATCAGCCCGATGAATCCGATTCTACCAACTCAAGCGCCGCAAAGAGTCAAGGTGCCAAATCCCTCACTTCTCAGCTCAAGGATATGGCGTTGAAGGCATCTGGAGCTTACAAGCATTGCGCCCCCTGCACCGGACCACAGACACAGAATCGATTCCGGGGAAGCAATGAGTCAGACGTGGAGTCGGATCGGTTCCGATGGTCCTACCGGAGAACAGCGAGTTCAAGCTCGACAACGACGAGGGCATGGGGGAAGGAGATGGAAGCGAGACTGAAGGGGATTTCGAGTGGGGAGGGAACGCCGAACTCTTCCAGCGGACGGCGGGTAGAGCCGGTGGTGCTGTTCGTCGAAGAGAACGAACCTAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTATTAATCACCTTTGTATCACTTCCGAGCGGAGGGAATGATTTGAAGCGAATCAGGTTCAGTCGGGAAACGTATAACAAATGGCAAGCGCAAAGATGGTGGGCAGAGAACTATGAAAGGGTCATGGAACTTTACAACGTTCAAAAGCTTAATCTCCATGCTTTCCCTCATCCAACACCACCAAGATCTGAAGATGAGCTCTCAAAACTGGAATCAGCAGAAGATATCCCTGTGACACCTCCACTAACCAAAGAACGATTACCTCGTAATCTAAATCGTCCAACAGGGATGGGAACGGGATACTCGTCGTCTGATTCTTTTGACCATCGTTCAATGCAATCCCGCCATCATCATGAATCGGGTGGTCTCAACTCAACCCCTAAAGTCTCCACCATAAGCACGGCCAAGACAGAAGCATCATCGATGGACGCCTCTATGAGAAGTAGCTCTTCCAGAGAGGCTGATCCTTCAGGGGACATATCAATCAGCAATGCCAGTGACCAAGACACTGAATGGGTCGAGCAGGATGAACCTGGGGTTTATCTAACTATCAGAGCATTGCCAGGTGGTAAAAGGGAGCTAAGACGAGTCAGATTCAGCCGAGAAAGATTTGGGGAGGTGCATGCTAGATTATGGTGGGAGGAGAATCGTGCTAGGGTACATGAACAATACTTGTGA 1119 0.5094 MLTCIARPKKLGHESLNQPDESDSTNSSAAKSQGAKSLTSQLKDMALKASGAYKHCAPCTGPQTQNRFRGSNESDVESDRFRWSYRRTASSSSTTTRAWGKEMEARLKGISSGEGTPNSSSGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPSGGNDLKRIRFSRETYNKWQAQRWWAENYERVMELYNVQKLNLHAFPHPTPPRSEDELSKLESAEDIPVTPPLTKERLPRNLNRPTGMGTGYSSSDSFDHRSMQSRHHHESGGLNSTPKVSTISTAKTEASSMDASMRSSSSREADPSGDISISNASDQDTEWVEQDEPGVYLTIRALPGGKRELRRVRFSRERFGEVHARLWWEENRARVHEQYL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1716 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Prci14g1716 372 Pfam Transcription factor BRX N-terminal domain 23 59 IPR027988 -
Prci14g1716 372 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Prci14g1716 372 MobiDBLite consensus disorder prediction 1 43 - -
Prci14g1716 372 ProSiteProfiles BRX domain profile. 317 372 IPR013591 -
Prci14g1716 372 MobiDBLite consensus disorder prediction 18 43 - -
Prci14g1716 372 MobiDBLite consensus disorder prediction 202 320 - -
Prci14g1716 372 MobiDBLite consensus disorder prediction 265 316 - -
Prci14g1716 372 Pfam Transcription factor regulating root and shoot growth via Pin3 317 371 IPR013591 -
Prci14g1716 372 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1716 Prci-Chr14 24435289 24445145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1716 1 372 Major Intrinsic Protein MIP AT1G31880 41.282 2.16e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1716 - - gmx:100794109 581.252