Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1712 ATGCCTCTCTTGTACTATGGGCTTGTAATTGTGGGAACAGCAGCCTTATTATTAGCAGTATACAACCTTATCATCATCAAACGTTGCGGCGGCCGCCGCCGCCACGTGCAATCATCGTCGTCGTCATCCTCATCATCATCACAGCCTTCAAATCGGGTGAGTGAAGCAGTGGCACCGATCAGTCAGAGTTATGATGGTCTGATATTCAACAGAAACTTGTTACTATCAAGCTTCAAGTACAAGAAAGAAGCAGCAGAAGGAGAGAGTGAGTGCCCAGTTTGTCTTTGTGGGTTTGAAGAAGGAGAAGAGGTGAGGAACTTGCCGAGATGCAAGCACAGCTTTCATGCACACTGCATAGACATGTGGCTCTTCTCTCACTTCGATTGCCCAATTTGTCGAACACCTGTCCTGCACTTTTGCCAGCTTTTTCCTCCTCCTCCGCCACCACGGCCGCCGGAGAGTTCTGGTGATGGCTTGCTCCGATCAGCCATTAATGGCGTCGCTGTTTGA 510 0.4941 MPLLYYGLVIVGTAALLLAVYNLIIIKRCGGRRRHVQSSSSSSSSSSQPSNRVSEAVAPISQSYDGLIFNRNLLLSSFKYKKEAAEGESECPVCLCGFEEGEEVRNLPRCKHSFHAHCIDMWLFSHFDCPICRTPVLHFCQLFPPPPPPRPPESSGDGLLRSAINGVAV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1712 169 Pfam Ring finger domain 90 133 IPR001841 -
Prci14g1712 169 CDD RING-H2_EL5-like 90 133 - -
Prci14g1712 169 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 136 IPR044675 -
Prci14g1712 169 SUPERFAMILY RING/U-box 78 145 - -
Prci14g1712 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 139 IPR013083 -
Prci14g1712 169 SMART ring_2 91 132 IPR001841 -
Prci14g1712 169 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1712 Prci-Chr14 24420321 24421438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1712 8 136 C3H Transcription Factor Family AT5G17600 40.152 2.55e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1712 - - aip:107634439 164.081