Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1673 ATGAATTCAGGAGCGTCACAGCTTGCATGCGAGGAGGCTTTGGTGGAAGCAAGCTGCTTGGGACGTTCCAGATTTTCTGAGCTACTTATGCTCTCCAACATGATTCGTCCTCAGGTTGCTGTTTATGCCCTTGTCTCTGCTTCTTGCAGAGGTTTCGTTGATGTTGTCCATGTGCTCATCAAGCATGGAGTCGATGTCAATGCAGTTAGCAGGACCAAGCTTCAATCCTCAAAGCCATTCCTTCTCGTTAATGTTGATTGCAATGCATTGTTTGCTGCTGTTGTCAGCAGACAGATTAACGTTGTTAAATTACTATTGGAGGTTGGCGTAAGGACAGACATCATGGTCAAACTAGGGGCATGGTCATGGGACAAGGACACAGGAGAGGAAATTCGTGTGGGTGCAGGACTAGCTGAGGCTTATCCTATAACCTGGTGTGCTGTGGAGTATTATGAATCCACTGGTTCAATATTGCGCATGCTTCTCTCTCACCTCTCCCCCAATAGTTACCACATTGGGAGGACCCTGTTGCACCATGCCATTCTCTGTAACAACGAAAGAGCCGTCACTGTACTCCTAAATTGTAATGCAGATTCTGAAGCGGCAATTCAAACAAACGAAGAAACCTGTGTTCTTCCAATTCACATGGCTGCGAGGCTTGGATTATGCAAAATTCTTAGATCTCTGATTAATACTAATTGTAACTTGAACTCTGTGACAAAATCTGGAGATTCTGCTTTAATGATATGTGCGAGGAATAAGCATGAGGATTGCCTCAGAGTTCTGGCATCAGCAGGTTCTGATATGGGGTTAGTAAATGCATATGGTGATTGTGTTACTTCAATTTCAAGCTCTATTCAGTGGAATGACGTGTTTGAGAAGGCAATTTTGGATGTGATTCGAGGTGGAAGTGTTGTCAATTCCACCAATTCATCGGCATTTTCTGCTTCGATATTTGCAACTCATGCAAATGATATGAAGGCATTAAAGAAGCTCATTGAACACAAGGACATAAACATAGATGAGCAAGATGGTAACGGATTCTCAGCTGCCATGATAGCCGTAGAACAAGGTAACACAGAAGCTTTCAGGTTGCTTCTTTATGCTGGTGCTGATGTTCTAATGCTGAAAAACAAGCATGGCCTCACGGCGCTTAATCTCGCTGAAGCAAACAAAAATAGCGAAGTGTTTCATAAGCTTATGCTTGAATATGCAATAGAGAAGAAATGCAGTTGTTCCACTGATGTAAATCCTCTTCACTGTGCAACGCGTCATAGGAACATAGATTTTGTTCAGAAACTAATAAAAGAAGGATATGACGTCAATTCTTTTGACGACAGTGGATATACACCTTTAATGTTAGCAGCAAGAAGACGACATGGAGCAATGTGTGAGCTTCTGATCTCTCATGGAGCCAAGTGTGATATCCAGAACGAGAGACACGAGACAGCACTTTCACTTGCAAGAGGAAACGGATCAGCAGAAGAAAATGATGCAGAACGAGTCATATTAAACGAGCTAGCTCGAAGATTAGTCTTGTGTGGGGCTCGAGTGAAGAAGCATACAAAGTGTGGTGAAGGGTCATTTCATAGGAAGCTGCTAGTGATGATGGGGGATTCGGGAATATTGAGGTGGGGAAAATCTGACAAGAGGAACGTGATTTGTAGAGAAGCTAAGGTTGGAGGCAGTACGAGGTTTCGATGGAACCGCAGGAACAAGCATGATTTTAATGAACAAGGATTGTTCCATGTGGTTACAACGAACAAGAAGGAGGTGCATTTTGCATGTCAAGGTGGGAATGAGATGGCTGAGTTGTGGGTGAGAGGGATTACATTAGTGACAAGAGAAGCCATTTTTGGCAAAAAGAGCCCGTAA 1875 0.4336 MNSGASQLACEEALVEASCLGRSRFSELLMLSNMIRPQVAVYALVSASCRGFVDVVHVLIKHGVDVNAVSRTKLQSSKPFLLVNVDCNALFAAVVSRQINVVKLLLEVGVRTDIMVKLGAWSWDKDTGEEIRVGAGLAEAYPITWCAVEYYESTGSILRMLLSHLSPNSYHIGRTLLHHAILCNNERAVTVLLNCNADSEAAIQTNEETCVLPIHMAARLGLCKILRSLINTNCNLNSVTKSGDSALMICARNKHEDCLRVLASAGSDMGLVNAYGDCVTSISSSIQWNDVFEKAILDVIRGGSVVNSTNSSAFSASIFATHANDMKALKKLIEHKDINIDEQDGNGFSAAMIAVEQGNTEAFRLLLYAGADVLMLKNKHGLTALNLAEANKNSEVFHKLMLEYAIEKKCSCSTDVNPLHCATRHRNIDFVQKLIKEGYDVNSFDDSGYTPLMLAARRRHGAMCELLISHGAKCDIQNERHETALSLARGNGSAEENDAERVILNELARRLVLCGARVKKHTKCGEGSFHRKLLVMMGDSGILRWGKSDKRNVICREAKVGGSTRFRWNRRNKHDFNEQGLFHVVTTNKKEVHFACQGGNEMAELWVRGITLVTREAIFGKKSP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1673 624 Gene3D - 140 295 IPR036770 -
Prci14g1673 624 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Prci14g1673 624 SUPERFAMILY Ankyrin repeat 40 115 IPR036770 -
Prci14g1673 624 ProSiteProfiles Ankyrin repeat profile. 242 274 IPR002110 GO:0005515
Prci14g1673 624 Gene3D - 402 535 IPR036770 -
Prci14g1673 624 Pfam Ankyrin repeats (many copies) 315 367 IPR002110 GO:0005515
Prci14g1673 624 Gene3D - 296 401 IPR036770 -
Prci14g1673 624 ProSiteProfiles Ankyrin repeat profile. 414 446 IPR002110 GO:0005515
Prci14g1673 624 ProSiteProfiles Ankyrin repeat region circular profile. 447 479 - -
Prci14g1673 624 SUPERFAMILY Ankyrin repeat 171 495 IPR036770 -
Prci14g1673 624 Gene3D - 29 126 IPR036770 -
Prci14g1673 624 ProSiteProfiles Ankyrin repeat region circular profile. 414 446 - -
Prci14g1673 624 PANTHER ANKYRIN REPEAT-CONTAINING 3 607 - -
Prci14g1673 624 ProSiteProfiles Ankyrin repeat profile. 447 479 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 242 271 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 380 410 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 172 201 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 209 238 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 39 68 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 85 114 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 447 476 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 414 443 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 309 342 IPR002110 GO:0005515
Prci14g1673 624 SMART ANK_2a 346 375 IPR002110 GO:0005515
Prci14g1673 624 Pfam Ankyrin repeats (3 copies) 390 478 IPR002110 GO:0005515
Prci14g1673 624 Pfam Ankyrin repeats (3 copies) 213 270 IPR002110 GO:0005515
Prci14g1673 624 ProSiteProfiles Ankyrin repeat region circular profile. 346 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1673 Prci-Chr14 24076777 24081519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1673 180 409 Ion Channels AT2G25600 27.160 1.76e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1673 - - gmx:100795638 874.004