Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1672 ATGGCGATTCTTCTGAACTCTTCCTCAATCCACACATCTCGTTCCTCCTTTGATCGCCAAACAGAGACCTTGCAACGCCTCCTTGATGCCGCTTTAAACGACGATACAGACTCTGCGTTTCAATGCATCGCCAATCCTCTCGTCGACGTCAATTTCATTGGAACGGCGAAACTCAGGTTCAAAACGACGGAGATCGTATTGCACGATGAGTTGCCTCATGAAGTCCGGTTCATGTACGAGGAGTTCAAGACCGACGTTTCTCCTCTGTTTGTCGCTGCTCACAACGGGAATTTGACACTGCTCAGGGAACTACTGAATAAGGGGGCTAAGGTGAACTTAAGATTGTTCCGAGGATATGCGATAACAGCAGCAGTAAGAGAAGGGCATGAAGAAGTAACGAAGCTCCTTATGAATTCAGGAGCGTCACAGCTTGCATGCGAGGAGGCTTTGGTGGAAGCAAGCTGCTTGGGACGTTCCAGATTTTCTGAGCTACTTATGCTCTCCAACATGATTCGTCCTCAGGTTGCTGTTTATGCCCTTGTCTCTGCTTCTTGCAGAGGTTTCGTTGATGTTGTCCATGTGCTCATCAAGCATGGAGTCGATGTCAATGCAGTTAGCAGGACCAAGCTTCAATCCTCAAAGCCATTCCTTCTCGTTAATGTTGATTGCAATGCATTGTTTGCTGCTGTTGTCAGCAGACAGATTAACGTTGTTAAATTACTATTGGAGGTTGGCGTAAGGACAGACATCATGGTCAAACTAGGGGCATGGTCATGGGACAAGGACACAGGAGAGGAAATTCGTGTGGGTGCAGGACTAGCTGAGGCTTATCCTATAACCTGGTGTGCTGTGGAGTATTATGAATCCACTGGTTCAATATTGCGCATGCTTCTCTCTCACCTCTCCCCCAATAGTTACCACATTGGGAGGACCCTGTTGCACCATGCCATTCTCTGTAACAACGAAAGAGCCGTCACTGTACTCCTAAATTGTAATGCAGATTCTGAAGCGGCAATTCAAACAAACGAAGAAACCTGTGTTCTTCCAATTCACATGGCTGCGAGGCTTGGATTATGCAAAATTCTTAGATCTCTGATTAATACTAATTGTAACTTGAACTCTGTGACAAAATCTGGAGATTCTGCTTTAATGATATGTGCGAGGAATAAGCATGAGGATTGCCTCAGAGTTCTGGCATCAGCAGGTTCTGATATGGGGTTAGTAAATGCATATGGTGATTGTGTTACTTCAATTTCAAGCTCTATTCAGTGGAATGACGTGTTTGAGAAGGCAATTTTGGATGTGATTCGAGGTGGAAGTGTTGTCAATTCCACCAATTCATCGGCATTTTCTGCTTCGATATTTGCAACTCATGCAAATGATATGAAGGCATTAAAGAAGCTCATTGAACACAAGGACATAAACATAGATGAGCAAGATGGTAACGGATTCTCAGCTGCCATGATAGCCGTAGAACAAGGTAACACAGAAGCTTTCAGGTTGCTTCTTTATGCTGGTGCTGATGTTCTAATGCTGAAAAACAAGCATGGCCTCACGGCGCTTAATCTCGCTGAAGCAAACAAAAATAGCGAAGTGTTTCATAAGCTTATGCTTGAATATGCAATAGAGAAGAAATGCAGTTGTTCCACTGATGTAAATCCTCTTCACTGTGCAACGCGTCATAGGAACATAGATTTTGTTCAGAAACTAATAAAAGAAGGATATGACGTCAATTCTTTTGACGACAGTGGATATACACCTTTAATGTTAGCAGCAAGAAGACGACATGGAGCAATGTGTGAGCTTCTGATCTCTCATGGAGCCAAGTGTGATATCCAGAACGAGAGACACGAGACAGCACTTTCACTTGCAAGAGGAAACGGATCAGCAGAAGAAAATGATGCAGAACGAGTCATATTAAACGAGCTAGCTCGAAGATTAGTCTTGTGTGGGGCTCGAGTGAAGAAGCATACAAAGTGTGGTGAAGGGTCATTTCATAGGAAGCTGCTAGTGATGATGGGGGATTCGGGAATATTGAGGTGGGGAAAATCTGACAAGAGGAACGTGATTTGTAGAGAAGCTAAGGTTGGAGGCAGTACGAGGTTTCGATGGAACCGCAGGAACAAGCATGATTTTAATGAACAAGGATTGTTCCATGTGGTTACAACGAACAAGAAGGAGGTGCATTTTGCATGTCAAGGTGGGAATGAGATGGCTGAGTTGTGGGTGAGAGGGATTACATTAGTGACAAGAGAAGCCATTTTTGGCAAAAAGAGCCCGTAA 2283 0.442 MAILLNSSSIHTSRSSFDRQTETLQRLLDAALNDDTDSAFQCIANPLVDVNFIGTAKLRFKTTEIVLHDELPHEVRFMYEEFKTDVSPLFVAAHNGNLTLLRELLNKGAKVNLRLFRGYAITAAVREGHEEVTKLLMNSGASQLACEEALVEASCLGRSRFSELLMLSNMIRPQVAVYALVSASCRGFVDVVHVLIKHGVDVNAVSRTKLQSSKPFLLVNVDCNALFAAVVSRQINVVKLLLEVGVRTDIMVKLGAWSWDKDTGEEIRVGAGLAEAYPITWCAVEYYESTGSILRMLLSHLSPNSYHIGRTLLHHAILCNNERAVTVLLNCNADSEAAIQTNEETCVLPIHMAARLGLCKILRSLINTNCNLNSVTKSGDSALMICARNKHEDCLRVLASAGSDMGLVNAYGDCVTSISSSIQWNDVFEKAILDVIRGGSVVNSTNSSAFSASIFATHANDMKALKKLIEHKDINIDEQDGNGFSAAMIAVEQGNTEAFRLLLYAGADVLMLKNKHGLTALNLAEANKNSEVFHKLMLEYAIEKKCSCSTDVNPLHCATRHRNIDFVQKLIKEGYDVNSFDDSGYTPLMLAARRRHGAMCELLISHGAKCDIQNERHETALSLARGNGSAEENDAERVILNELARRLVLCGARVKKHTKCGEGSFHRKLLVMMGDSGILRWGKSDKRNVICREAKVGGSTRFRWNRRNKHDFNEQGLFHVVTTNKKEVHFACQGGNEMAELWVRGITLVTREAIFGKKSP 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1672 760 SUPERFAMILY Ankyrin repeat 27 251 IPR036770 -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat region circular profile. 583 615 - -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat region circular profile. 482 509 - -
Prci14g1672 760 Gene3D - 6 155 IPR036770 -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Prci14g1672 760 Gene3D - 297 422 IPR036770 -
Prci14g1672 760 PANTHER ANKYRIN REPEAT-CONTAINING 19 743 - -
Prci14g1672 760 SUPERFAMILY Ankyrin repeat 307 631 IPR036770 -
Prci14g1672 760 SMART ANK_2a 116 145 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 516 546 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 175 204 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 583 612 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 221 250 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 378 407 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 445 478 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 345 374 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 482 511 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 308 337 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 550 579 IPR002110 GO:0005515
Prci14g1672 760 SMART ANK_2a 84 113 IPR002110 GO:0005515
Prci14g1672 760 Pfam Ankyrin repeats (many copies) 349 398 IPR002110 GO:0005515
Prci14g1672 760 Pfam Ankyrin repeats (many copies) 451 503 IPR002110 GO:0005515
Prci14g1672 760 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Prci14g1672 760 Gene3D - 539 671 IPR036770 -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat region circular profile. 84 114 - -
Prci14g1672 760 Pfam Ankyrin repeats (3 copies) 526 614 IPR002110 GO:0005515
Prci14g1672 760 Gene3D - 423 538 IPR036770 -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat region circular profile. 550 582 - -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat profile. 482 514 IPR002110 GO:0005515
Prci14g1672 760 Gene3D - 169 262 IPR036770 -
Prci14g1672 760 ProSiteProfiles Ankyrin repeat profile. 378 410 IPR002110 GO:0005515
Prci14g1672 760 ProSiteProfiles Ankyrin repeat profile. 84 116 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1672 Prci-Chr14 24076777 24081814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1672 316 545 Ion Channels AT2G25600 26.667 1.63e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1672 - - gmx:100795638 1031.17