Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1636 ATGCCGGACATGGACGGTTTCAAACTTCTCGAGCAAGTCGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGAGAAACAAGGAGGGTGATGAAGGGCGTTCAGCATGGAGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAGCTGCGAAATATATGGCAACATGTGTTAAGAAAAAGGATGCGCGAGGCAAGAGAATTTGGGGGTCTTGAGGGCTTTCAATTGATGAGAAATGGAGCAGATCAGTTTGATGATGGGAATTTATTTGCTATAGAAGATATGACCTCAACGAAGAAAAGGAAAAACCTGGGTAGCAAACGTGATAACAAGGAATTTAGAGATCAATCTTCCACAAAGAAAGCCAGAGTAGTTTGGTCTGTAGATCTTCATCAGAAATTTGTCAAGGCTGTGAATCAGCTTGGATTTGATAAAGTTGGTCCCAAGAAAATACTTGATTTGATGAATGTTCCATGGTTGACTCGGGATAATGTTGCTAGTCACTTGCAGAAATACCGGCTGTACCTGAGTAGGTTACAGAAGGCTGGAGATAAGAATCCCTCCTCTAGTGGGATTCAGCATTCGGATTTAGTTTCAGAAGATCCTGCGGGAAGTTTCTCTTTTCAGAACCCAATGAACAGGCAACAAAATGATGTTTCAATTGACAGCCATAAATATGCAGATGGAGCTATACAACTTCAGAATGCGGATACAATAAATCTCGAAAGTAATCTCAAAGGAATCGTTTCAGAGGCTTTGACGGATAAAAAAGAAGACTTGACTGCTAACATTCGAGATACAGAAATAAGAAAGAGTCCACGGAAGGTCAATGATCAGTCTTTTGCACCTCCAGATTCAGAAGGAAGCTATGCAGCATTTGATTGCGCCAACCCTTGGAGGGAATTCCCAGAAATGCAACTCAAAAAACACCAGCCATATCTTCCAATTAAGGATCACTTCAGCCACTTGCCATTACATGGTAGGCAGCATCTCATCAAAATTGATCAATCACAAGAAGATGCTTCAATTAGATCTAACCCACCTGTAATGGAGAGAGAAACTGCTGCCTGTATTGAAACCAACCCTACGTATGTTGAACACACCAGCGATTATGCCAGTTCTGTTAGTTCCATAGGAAGTGCAGATGGCTTTTCTATAAAGTCCAAGAGCTTTATGGGGAATGATCAAACTTTAGAACCCGTTTCTACTCCAAATCTCAGTGGGAAAACAGAGGGCTTTAATCTTAAATCTGTTTCTGACCTGGAATTTCACCAACCAAACCTACATTTGGGAGGTGAGTTTGCTTCTGCCCCTTTGGAGGAGGACTTGAAATCCTTCTGGCTACAAGGTGAACGCTGTATGAACTCTGGGCAGCAGAACATAGACATGCCAGAGTATTATGATCCAGGACTCACCGGGGAAGTTCCTGTTCATTTATTTGATACAGCTGATTTTTCGGCAGTAGATCAAGGCCTTTTCATAGCATGA 1500 0.4207 MPDMDGFKLLEQVGLEMDLPVIMMSVDGETRRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRMREAREFGGLEGFQLMRNGADQFDDGNLFAIEDMTSTKKRKNLGSKRDNKEFRDQSSTKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRDNVASHLQKYRLYLSRLQKAGDKNPSSSGIQHSDLVSEDPAGSFSFQNPMNRQQNDVSIDSHKYADGAIQLQNADTINLESNLKGIVSEALTDKKEDLTANIRDTEIRKSPRKVNDQSFAPPDSEGSYAAFDCANPWREFPEMQLKKHQPYLPIKDHFSHLPLHGRQHLIKIDQSQEDASIRSNPPVMERETAACIETNPTYVEHTSDYASSVSSIGSADGFSIKSKSFMGNDQTLEPVSTPNLSGKTEGFNLKSVSDLEFHQPNLHLGGEFASAPLEEDLKSFWLQGERCMNSGQQNIDMPEYYDPGLTGEVPVHLFDTADFSAVDQGLFIA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1636 499 Coils Coil 254 274 - -
Prci14g1636 499 SUPERFAMILY CheY-like 1 69 IPR011006 -
Prci14g1636 499 CDD REC_typeB_ARR-like 1 62 - -
Prci14g1636 499 Pfam Response regulator receiver domain 1 57 IPR001789 GO:0000160
Prci14g1636 499 ProSiteProfiles Response regulatory domain profile. 1 62 IPR001789 GO:0000160
Prci14g1636 499 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 236 IPR045279 GO:0009736
Prci14g1636 499 MobiDBLite consensus disorder prediction 186 217 - -
Prci14g1636 499 SUPERFAMILY Homeodomain-like 123 182 IPR009057 -
Prci14g1636 499 Gene3D - 121 184 - -
Prci14g1636 499 Gene3D - 1 69 - -
Prci14g1636 499 FunFam Two-component response regulator 121 184 - -
Prci14g1636 499 Pfam Myb-like DNA-binding domain 127 177 IPR001005 -
Prci14g1636 499 NCBIfam myb-like DNA-binding domain, SHAQKYF class 125 178 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1636 Prci-Chr14 23788720 23793182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1636 21 499 Response Regulator Gene Family AT1G67710 36.948 5.11e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci14g1636 Response_reg 6.3e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1636 - K14491 gmx:100806394 612.838