Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1635 ATGAATAATAATGCGTTATCTTCTCGATGCGATTCTTTCCCGGCTGGTCTCCGAGTTCTCGTCGTCGACGACGATTTGACATGGCTCGCGATTATTGAGAAGATGCTCAAGAAGTGCTCTTACGAAGTGACTACATGTTGTTTAGCAAGAGAGGCTCTAAACTTGCTTCGTGAAAGGAAAAATGGATATGACATTGTGATCAGCGATGTAAACATGCCGGACATGGACGGTTTCAAACTTCTCGAGCAAGTCGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGAGAAACAAGGAGGGTGATGAAGGGCGTTCAGCATGGAGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAGCTGCGAAATATATGGCAACATGTGTTAAGAAAAAGGATGCGCGAGGCAAGAGAATTTGGGGGTCTTGAGGGCTTTCAATTGATGAGAAATGGAGCAGATCAGTTTGATGATGGGAATTTATTTGCTATAGAAGATATGACCTCAACGAAGAAAAGGAAAAACCTGGGTAGCAAACGTGATAACAAGGAATTTAGAGATCAATCTTCCACAAAGAAAGCCAGAGTAGTTTGGTCTGTAGATCTTCATCAGAAATTTGTCAAGGCTGTGAATCAGCTTGGATTTGATAAAGTTGGTCCCAAGAAAATACTTGATTTGATGAATGTTCCATGGTTGACTCGGGATAATGTTGCTAGTCACTTGCAGAAATACCGGCTGTACCTGAGTAGGTTACAGAAGGCTGGAGATAAGAATCCCTCCTCTAGTGGGATTCAGCATTCGGATTTAGTTTCAGAAGATCCTGCGGGAAGTTTCTCTTTTCAGAACCCAATGAACAGGCAACAAAATGATGTTTCAATTGACAGCCATAAATATGCAGATGGAGCTATACAACTTCAGAATGCGGATACAATAAATCTCGAAAGTAATCTCAAAGGAATCGTTTCAGAGGCTTTGACGGATAAAAAAGAAGACTTGACTGCTAACATTCGAGATACAGAAATAAGAAAGAGTCCACGGAAGGTCAATGATCAGTCTTTTGCACCTCCAGATTCAGAAGGAAGCTATGCAGCATTTGATTGCGCCAACCCTTGGAGGGAATTCCCAGAAATGCAACTCAAAAAACACCAGCCATATCTTCCAATTAAGGATCACTTCAGCCACTTGCCATTACATGGTAGGCAGCATCTCATCAAAATTGATCAATCACAAGAAGATGCTTCAATTAGATCTAACCCACCTGTAATGGAGAGAGAAACTGCTGCCTGTATTGAAACCAACCCTACGTATGTTGAACACACCAGCGATTATGCCAGTTCTGTTAGTTCCATAGGAAGTGCAGATGGCTTTTCTATAAAGTCCAAGAGCTTTATGGGGAATGATCAAACTTTAGAACCCGTTTCTACTCCAAATCTCAGTGGGAAAACAGAGGGCTTTAATCTTAAATCTGTTTCTGACCTGGAATTTCACCAACCAAACCTACATTTGGGAGGTGAGTTTGCTTCTGCCCCTTTGGAGGAGGACTTGAAATCCTTCTGGCTACAAGGTGAACGCTGTATGAACTCTGGGCAGCAGAACATAGACATGCCAGAGTATTATGATCCAGGACTCACCGGGGAAGTTCCTGTTCATTTATTTGATACAGCTGATTTTTCGGCAGTAGATCAAGGCCTTTTCATAGCATGA 1713 0.4221 MNNNALSSRCDSFPAGLRVLVVDDDLTWLAIIEKMLKKCSYEVTTCCLAREALNLLRERKNGYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETRRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRMREAREFGGLEGFQLMRNGADQFDDGNLFAIEDMTSTKKRKNLGSKRDNKEFRDQSSTKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRDNVASHLQKYRLYLSRLQKAGDKNPSSSGIQHSDLVSEDPAGSFSFQNPMNRQQNDVSIDSHKYADGAIQLQNADTINLESNLKGIVSEALTDKKEDLTANIRDTEIRKSPRKVNDQSFAPPDSEGSYAAFDCANPWREFPEMQLKKHQPYLPIKDHFSHLPLHGRQHLIKIDQSQEDASIRSNPPVMERETAACIETNPTYVEHTSDYASSVSSIGSADGFSIKSKSFMGNDQTLEPVSTPNLSGKTEGFNLKSVSDLEFHQPNLHLGGEFASAPLEEDLKSFWLQGERCMNSGQQNIDMPEYYDPGLTGEVPVHLFDTADFSAVDQGLFIA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1635 570 Gene3D - 192 255 - -
Prci14g1635 570 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 304 IPR045279 GO:0009736
Prci14g1635 570 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Prci14g1635 570 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Prci14g1635 570 MobiDBLite consensus disorder prediction 257 288 - -
Prci14g1635 570 CDD REC_typeB_ARR-like 19 133 - -
Prci14g1635 570 SUPERFAMILY CheY-like 16 140 IPR011006 -
Prci14g1635 570 FunFam Two-component response regulator 192 255 - -
Prci14g1635 570 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Prci14g1635 570 Gene3D - 17 143 - -
Prci14g1635 570 PIRSF RR_ARR_type-B 1 564 IPR017053 GO:0003677|GO:0003700|GO:0009736
Prci14g1635 570 SMART REC_2 17 129 IPR001789 GO:0000160
Prci14g1635 570 SUPERFAMILY Homeodomain-like 194 253 IPR009057 -
Prci14g1635 570 Coils Coil 325 345 - -
Prci14g1635 570 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1635 Prci-Chr14 23788720 23793183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1635 11 260 Response Regulator Gene Family AT2G25180 52.874 2.95e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci14g1635 Response_reg 1.5e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1635 - K14491 gmx:100806394 708.368