Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1629 ATGTGGCAGAATCACACCCATAAGTCGTCATCTTCTTCTTCGTGTTTGAGAGATTCTATTGTGGCTCTCGAAGCTGATATTCAACATGCCAATACCCTGGCAGCATCAGTACCACAAGGTTATGGAGGGGACCATATTCAGATGAAACTATCATACAGTCCTCTTGCTCCTTTATTCCTTAATTTGATCCAATGGATGGATTTTACTTGTACCGATTCTCTCCCTACTTATCTTGGCTTATTCCACATTCTCATTTACAAGGTGTACGATGGGATGCCAATGCCATCATTATCCTCCAAAGAAAGAAAAGCCTCTCTCAAGGATTTCTATGGTGTGATATACCCATCACTGAAGCTACTTGAAGGGGAGTTTAAAGCACATGAAGCTAAAGAGAATAATAGAAGCAATGGGACACAATTGGTGAGCAGAAAGAGCCCCAAGAGAGGGTTTGATGATAAAGAACAAGACTTGAGAGATGATGAATGTGGAATCTGCATGGAGATCAGCATGATCATGGTCCTCCCTAATTGTGGCCATTCCCTCTGCATTACTTGCTTCCATGACTGGAATGTGAGATCAGAATCATGCCCATTTTGCAGAAGAAGCCTGAAGAGAGTGAGTCCAACAGATCTGTGGGTTGTGATCGACAACAACGAGGTGGTCGACAGACTCACGGTTTCAAAAGACAACCTCAGACGCTTCTATCTCTACGTTGAATCTCTGCCTCTTCTCACTCACGATGCTCATGATGTCTTCGTCTTCAACTGTATGCTCTGA 777 0.4337 MWQNHTHKSSSSSSCLRDSIVALEADIQHANTLAASVPQGYGGDHIQMKLSYSPLAPLFLNLIQWMDFTCTDSLPTYLGLFHILIYKVYDGMPMPSLSSKERKASLKDFYGVIYPSLKLLEGEFKAHEAKENNRSNGTQLVSRKSPKRGFDDKEQDLRDDECGICMEISMIMVLPNCGHSLCITCFHDWNVRSESCPFCRRSLKRVSPTDLWVVIDNNEVVDRLTVSKDNLRRFYLYVESLPLLTHDAHDVFVFNCML 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1629 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 226 IPR013083 -
Prci14g1629 258 MobiDBLite consensus disorder prediction 130 155 - -
Prci14g1629 258 SMART ring_2 162 199 IPR001841 -
Prci14g1629 258 ProSiteProfiles Zinc finger RING-type profile. 162 200 IPR001841 -
Prci14g1629 258 SUPERFAMILY RING/U-box 153 206 - -
Prci14g1629 258 PANTHER RING FINGER PROTEIN 41, 151 15 250 - -
Prci14g1629 258 Pfam Zinc finger, C3HC4 type (RING finger) 159 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1629 Prci-Chr14 23727266 23732225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1629 110 211 C3H Transcription Factor Family AT5G01960 34.579 1.30e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1629 - - pcin:129293983 534.643