Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1604 ATGGCTCCATCTAGAAAATCCAAAAGTGTCACTAACAAAGATAAAAATACAGAGAATGTTAGCAAGACTAGGCCGCAGGGTAGTCCAGGAATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGACCTCAATGGAGTAAGGAGGAGCTAGAGTGTTTCTATGAAGCTTTCCGTAAATATGGGAAAGACTGGAAGAAGGTGGCTGCTGCTGTGCATAATAGATCTTTGGAAATGGTAGAAGCTCTATACTCTATGAATCGAGCATACTTGTCTCTTCCAGAGGGCACTGCTTCTGTGGTTGGACTCATAGCAATGATGACGGATCATTATAATGTACTGGGAGGAAGTGATAGTGGACAAGAAACCAACGAAGAAACAGAAGCATTTACAAAGCCTTCAAAATCTTCGCGGCAGAAATGTTCAGATGGCAACTATAAAGCATTAGATGGACATTTTTCAGATCATTCTCAGTCACATTCAGTTCTATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGGCATTCTGGAATAAGTTCTCATGCTGTTCGCAAAAGAACTCGTGTCCCTGTTTCACATTCCATTGGTAAGGATATTGGTGAAAAGCGTTTTTCACCAGCTAGGCAAGGTTCCAGGCAAATGGTCGACAGTAATGATGTTGCTCATAAGATTGCATTAGCACTGACAGAGGCTTCACAAGTAGGCGGGTCTTCCAAAGTTTCTAGATCACCAAACAATAAATCTAAGGGCATTATGTCATCACCTGGTCAGAATAACGAGAGGAAGCACACTAAATCAGAAGCAGCAGCATCCAAATTTTGCCATTCTGACTTGAATGAGGGTACCTCTGAATTGAGTTTAGGAAGCACGGGGTGTGGCAATGGAGATTATTCTCGAAAACTGAATCAACGGAGCAACAGAGTGAATGCCAGAAGAGGAAAACATGAAGAAAAGGGAACAAAATACTGCAGAAAAAAGTTCGAACTCAAAGGAAATGTGAATAAGCATTTGGATGATGTAAAGGAAGCTTCCAGTGGGACAGATGAAGATAAAGGACTGGATTTAATCAAGTATAAAATAGACACTAATTTTGCTGGCACCAAAAGTGCTAGGTCCTCTTTCAAGAGTCTCAGGAAGGAAAGTAGAAAAGTATTGCTTGAAAAAAAAGAGGGGAATCAAAGAATTTGTGGTCTGGTTACTGAAAGAATATACAAATGCCATTGTTATCCGTGTGAGCAGAGAATTCAGAAGAAAGATAAAGCAATTACCCGTGAAGATGAAGGCTCTTCTTTTGATGCTCTGAATGCCTTGGCTGATCTGTCTTTGATGATGCCAGTTGCAAACCCTGACACCGAGTCACCTGTTCGGGTGATGGAAGAAAGCCAAGGAGTTGTTGATGAGTCTCAAGTGGAAACCGATCATGCAATTTTGAGTGATGAAAGCACTGCTTTAAGTAAACTGGGTTTGATTTCTTCTGATCATGGAGTTTTAGTTCCTCAAGAAGAAGGCGCCTTCCACCTTGATGCTAGAAAGAGGAAAAGAAGACAAACATCTTCAATATTGAAAGCTACTGACAACGTGACAAAGTCTGTTGCCAAGGGTAAGCGCTCTTCTATTTCTACACCACAATCAAGACAATTAAAGGTGGTACAACCCCCAGGAATGATGTCTTCAAGTAATGATGACAAAGGAGGAAGGGATGATTTGCTGCTATTACCCATGAAAGTTTCACCTACAGACAAAGCGGGTCTAGCAACCAAAGGAAGGCATAGGCGGAAGATGGAAAAACCAAAACCAATGATACAACAAGATAGAAAGGTGTCAGAAAATAATTTTAGTGGTCAACATATTAAATCCATTCTCCAGAACAGCGTATTAAGACACAAGGAAAAGCTTATTCATTGCCTGTCTTCACATCAAATTCGGCGATGGTGCACTTTTGAGTGGTTTTACAGTGCTATAGATTACCCATGGTTTGCAAAGATGGAGTTCATGGAGTACTTGGACCATGTTGGATTGGGGCATGTTCCTAGACTGACTCGTATTGAGTGGGGGGTCATTAGGAGTTCTCTTGGCAGACCTCGGAGGTTTTCTAAGCAATTTTTGGTAGAAGAAAAAACAAAGTTAAATCAATACCGGGACTCTGTTAGGGCACATTATGCAGAACTTCTTGCTGGTACCAGGGAAGGCCTTCCAACTGATTTGGCCAGGCCGTTAATTGTTGGACAGCGTGTCATTGCTATTCACCCAAAGACGAGAGAGATTCAAGATGGAAGCGTACTAACTGTTGACAACTGTAGGTGTCAGGTTCAGTTTGACCAGCCTGAGCTGGGGGTTGAATTTATCATGGATATTGACTGCATGCCTCTGAATCCTAATGAAAATATGCCAGCATCTCTGATAAGGCGCAGTGTGATTCCGGATAAACTAGATGACAACCTTATTGAGTTCAAGCTTAATGGGAAATTGAAACAAGGAAAGATTGAGGAGCACAGGATATTGTTCCCTAGCGAGAACTTTGATCATGTTGATGCTCCTTATATACCCCCCTCAGCTCATGGCGTCAAAAGTTTATTGAACCAGGGCATCTCTTCAAGTTCCAAATTGCAGGCTAATGTTGCTTGCAATGAGATCGGTAATGCCTTACTGTCAGCAAATTCTAAAGCTTTTTTTCATGAACATGTTCCATCCAAAGAAGCTGGCACAAATGCTGTTTTTGAGCTGGCTCGTGCTCTTCACAAAAAGGAAATTGTGCTGTCTGAACTGAAGCAAATGAATGATGAGGCATGTGAAAGACGGAACTATGGGGACCACTCTTTAAAGGATTCAGAGCCGTTTAAGAGGCATTATGCTGCAGCATTGTTGCAGTTAAATGAAGTGAACCAGCAGGTCTCTTCTGCCTTGTTTTGCATGAGACAGCATAACACATATCAGGGGAACTCTAATTTACGACCAAGGCCCACAGCTAATTTGGATGATCTTGGTGGTCATGCTAGCTCTTCGTATTGTTCAGCTTCTCACAACCAAAATTGTCGATCTCATATAGCTGAAATTATTGAAAGTTCTAAAAGAAGAGCCCGTACAATGGTTGGTGCAGCTATTCAGGCGATGTCATCTTTTAGTAAGACACAGAGTAAGGTTGAAGGAATTGAGGAGGCAATTAATTTTATAAATAATCGGCTTTCAGTGGATGACCATGCTGCTCCATCCTCGCAATTCATGCCCACAGATTCTGTTCATGCCACACTAGTTTCTCAGGATCAGATGATTGCAAGTAAATCAAATCCTCTGCCAAGTAGTCATTTACAAGATCCTGAACTAAACAGCTCATCTGATCAAAATGAAGTGAAAATTCCCTCGGAACTTATTTCTCAATGTCTAGCTACATTGCTGATGATCCAGAAATGTACAGAAAGACATTTCCCACCTGCCGATGTTGCTCACGTGCTAGATTCTGCAGTCACAAGCTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGGAGAGATACAGAAATGCATGGGTGTCATCAGAAATCAGATATTGGCACTCATACCTACCCAAACTACCTAG 3576 0.4158 MAPSRKSKSVTNKDKNTENVSKTRPQGSPGIQKKRKLADMLGPQWSKEELECFYEAFRKYGKDWKKVAAAVHNRSLEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYNVLGGSDSGQETNEETEAFTKPSKSSRQKCSDGNYKALDGHFSDHSQSHSVLSGDGCLSLLKKRHSGISSHAVRKRTPXVPVSHSIGKDIGEKRFSPARQGSRQMVDSNDVAHKIALALTEASQVGGSSKVSRSPNNKSKGIMSSPGQNNERKHTKSEAAASKFCHSDLNEGTSELSLGSTGCGNGDYSRKLNQRSNRVNARRGKHEEKGTKYCRKKFELKGNVNKHLDDVKEASSGTDEDKGLDLIKYKIDTNFAGTKSARSSFKSLRKESRKVLLEKKEGNQRICGLVTERIYKCHCYPCEQRIQKKDKAITREDEGSSFDALNALADLSLMMPVANPDTESPVRVMEESQGVVDESQVETDHAILSDESTALSKLGLISSDHGVLVPQEEGAFHLDARKRKRRQTSSILKATDNVTKSVAKGKRSSISTPQSRQLKVVQPPGMMSSSNDDKGGRDDLLLLPMKVSPTDKAGLATKGRHRRKMEKPKPMIQQDRKVSENNFSGQHIKSILQNSVLRHKEKLIHCLSSHQIRRWCTFEWFYSAIDYPWFAKMEFMEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSKQFLVEEKTKLNQYRDSVRAHYAELLAGTREGLPTDLARPLIVGQRVIAIHPKTREIQDGSVLTVDNCRCQVQFDQPELGVEFIMDIDCMPLNPNENMPASLIRRSVIPDKLDDNLIEFKLNGKLKQGKIEEHRILFPSENFDHVDAPYIPPSAHGVKSLLNQGISSSSKLQANVACNEIGNALLSANSKAFFHEHVPSKEAGTNAVFELARALHKKEIVLSELKQMNDEACERRNYGDHSLKDSEPFKRHYAAALLQLNEVNQQVSSALFCMRQHNTYQGNSNLRPRPTANLDDLGGHASSSYCSASHNQNCRSHIAEIIESSKRRARTMVGAAIQAMSSFSKTQSKVEGIEEAINFINNRLSVDDHAAPSSQFMPTDSVHATLVSQDQMIASKSNPLPSSHLQDPELNSSSDQNEVKIPSELISQCLATLLMIQKCTERHFPPADVAHVLDSAVTSLQPFCSKNLPIYGEIQKCMGVIRNQILALIPTQTT 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1604 1192 Gene3D - 3 97 - -
Prci14g1604 1192 SMART DIRP_2 651 752 IPR033471 -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 236 273 - -
Prci14g1604 1192 Pfam DIRP 650 751 IPR033471 -
Prci14g1604 1192 SMART sant 41 89 IPR001005 -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 980 1000 - -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 286 305 - -
Prci14g1604 1192 CDD SANT 45 79 IPR001005 -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 533 570 - -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 286 313 - -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 1 36 - -
Prci14g1604 1192 Pfam Myb-like DNA-binding domain 44 79 IPR001005 -
Prci14g1604 1192 Pfam LIN9 C-terminal 906 974 IPR045831 -
Prci14g1604 1192 SUPERFAMILY Homeodomain-like 41 87 IPR009057 -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 236 260 - -
Prci14g1604 1192 PANTHER LIN-9 1 1191 IPR010561 GO:0006351|GO:0017053
Prci14g1604 1192 Coils Coil 909 929 - -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 1091 1115 - -
Prci14g1604 1192 ProSiteProfiles SANT domain profile. 40 77 IPR017884 -
Prci14g1604 1192 MobiDBLite consensus disorder prediction 533 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1604 Prci-Chr14 23433236 23455788 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci14g1604 DIRP 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1604 - - pcin:129292382 2370.5